RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CACNG1Q06432 222 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 CDC20Q12834 499 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 TUBB3Q13509 450 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 SNX1Q13596 522 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 DBN1Q16643 649 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 DEFB109BQ30KR1 87 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 PWWP2BQ6NUJ5 590 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 PRUNE1Q86TP1 453 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 OOSP2Q86WS3 158 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 OR52K1Q8NGK4 314 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 STYXQ8WUJ0 223 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 C1orf54Q8WWF1 131 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 STARD8Q92502 1023 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 PPM1MQ96MI6 270 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 CATSPER2Q96P56 530 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 CD180Q99467 661 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 NRTNQ99748 197 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 COG4Q9H9E3 785 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 ETNK1Q9HBU6 452 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 SMARCAL1Q9NZC9 954 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 RARRES3Q9UL19 164 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 PADI1Q9ULC6 663 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 ZNF148Q9UQR1 794 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 HEBP2Q9Y5Z4 205 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 CCDC162PA2VCL2 907 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 TLCD2A6NGC4 264 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 OR51F1A6NGY5 319 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 GOLGA6L6A8MZA4 724 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 NTRK1P04629 796 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 ETS1P14921 441 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 NDUFS1P28331 727 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 PREPP48147 710 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 LMAN1P49257 510 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 KPNA2P52292 529 aaKnown RBP11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 HSD11B2P80365 405 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 MC1RQ01726 317 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 ACY1Q03154 408 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 KCNAB2Q13303 367 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 OASLQ15646 514 aaKnown RBP11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 SKIDA1Q1XH10 827 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 ZNF658BQ4V348 819 aaPredicted RBP11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 SEL1L2Q5TEA6 688 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 LINC00523Q86TU6 105 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 KMT5CQ86Y97 462 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 SLC13A5Q86YT5 568 aaPredicted RBP11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 DNAAF3Q8N9W5 541 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 ACVR1CQ8NER5 493 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 LCN9Q8WX39 176 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 TSGA10Q9BZW7 698 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 SLC25A18Q9H1K4 315 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 OR52A5Q9H2C5 316 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 ADNPQ9H2P0 1102 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 SRMSQ9H3Y6 488 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 VPS37BQ9H9H4 285 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 FGF21Q9NSA1 209 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 PRSS21Q9Y6M0 314 aa11.62□□□□□ -0.55
CCHCR1-215ENST00000488920 GOLGA6L3A6NEY3 463 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 SLC9B1P1A6NJY1 282 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 E7EVH7 732 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 IFRD1O00458 451 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 TERTO14746 1132 aaKnown RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 KRT86O43790 486 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 ZBTB11O95625 1053 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 GAS8O95995 478 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 PSMA3P25788 255 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 MSNP26038 577 aaKnown RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 GRIA1P42261 906 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 PRKAA1Q13131 559 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 PRKG2Q13237 762 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 ERV3-1Q14264 604 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 BRD3Q15059 726 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 RPS6KA1Q15418 735 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 GPR19Q15760 415 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 CYB5D1Q6P9G0 228 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 ZNF449Q6P9G9 518 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 PPP1R21Q6ZMI0 780 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 BPHLQ86WA6 291 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 PTRH1Q86Y79 214 aaKnown RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 D2HGDHQ8N465 521 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 CT55Q8WUE5 264 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 APOBEC4Q8WW27 367 aaKnown RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 HDAC10Q969S8 669 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 FRMD8P1Q9BZ68 369 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 TRIM4Q9C037 500 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 XKR8Q9H6D3 395 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 AKIRIN1Q9H9L7 192 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 LHX9Q9NQ69 397 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 RAB6BQ9NRW1 208 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 SLC2A6Q9UGQ3 507 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 PCDHB3Q9Y5E6 796 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 COL6A6A6NMZ7 2263 aa11.61□□□□□ -0.55
CCHCR1-215ENST00000488920 PIPSLA2A3N6 862 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 GSAPA4D1B5 854 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 ERI2A8K979 691 aaKnown RBP11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 BTN3A3O00478 584 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 SUV39H1O43463 412 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 SUN1O94901 812 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 AP2A2O94973 939 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms