RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 THUMPD3Q9BV44 507 aaKnown RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ADGRE3Q9BY15 652 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 POLR1BQ9H9Y6 1135 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 NTN4Q9HB63 628 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 IL17CQ9P0M4 197 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 LEF1Q9UJU2 399 aaPredicted RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ZNF711Q9Y462 761 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 SLC30A1Q9Y6M5 507 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 A0A1W2PPW3 197 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 GAPDHSO14556 408 aaPredicted RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 FFAR2O15552 330 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 MRPL19P49406 292 aaKnown RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 HPCAP84074 193 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 CPSF6Q16630 551 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 IMPG1Q17R60 797 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 SPANXN4Q5MJ08 99 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 KIAA1841Q6NSI8 718 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 SPRED1Q7Z699 444 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 STK32CQ86UX6 486 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ZFAND4Q86XD8 727 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 GAB3Q8WWW8 586 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ISOC1Q96CN7 298 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ERLEC1Q96DZ1 483 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 CLSTN3Q9BQT9 956 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 RASAL1O95294 804 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 SELPP16109 830 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 MYF6P23409 242 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 RPS9P46781 194 aaKnown RBP12.46□□□□□ -0.42
CLIC4-202ENST00000488683 CLCN4P51793 760 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 CYP4F8P98187 520 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 FGD3Q5JSP0 725 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 SUSD1Q6UWL2 747 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 XKR5Q6UX68 686 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 CRIPAKQ8N1N5 446 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 SLC43A3Q8NBI5 491 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 TSPEARQ8WU66 669 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 FOXJ1Q92949 421 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 TMBIM1Q969X1 311 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 FEM1AQ9BSK4 669 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.42
CLIC4-202ENST00000488683 CWH43Q9H720 699 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 ELAC1Q9H777 363 aaKnown RBP12.46□□□□□ -0.42
CLIC4-202ENST00000488683 HPS4Q9NQG7 708 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 LATS2Q9NRM7 1088 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 PKP3Q9Y446 797 aa12.46□□□□□ -0.42
CLIC4-202ENST00000488683 SPEGQ15772 3267 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 SCN8AQ9UQD0 1980 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 FAM234BA2RU67 622 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 H7C0S8 307 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 H7C4K7 107 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 GPIP06744 558 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 HMOX2P30519 316 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 PTGER3P43115 390 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 EMX2Q04743 252 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 GRIK2Q13002 908 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ARHGEF7Q14155 803 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 RAB39AQ14964 217 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 SLC8B1Q6J4K2 584 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 CHST9Q7L1S5 443 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 GPR141Q7Z602 305 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 LIX1Q8N485 282 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 PACRGLQ8N7B6 248 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 LMNTD1Q8N9Z9 388 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 PLD4Q96BZ4 506 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 MYOCQ99972 504 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 C9orf16Q9BUW7 83 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ZIM2Q9NZV7 527 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ANKRD33BA6NCL7 494 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ANKRD28O15084 1053 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 FZD6O60353 706 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 DIRAS1O95057 198 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ESR1P03372 595 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 COL6A1P12109 1028 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 CD9P21926 228 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 SMARCB1Q12824 385 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 TRAF3Q13114 568 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 PRKG2Q13237 762 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 CHRNA6Q15825 494 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ADRM1Q16186 407 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 SPOUT1Q5T280 376 aaKnown RBP12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ZNF648Q5T619 568 aaPredicted RBP12.45□□□□□ -0.42
CLIC4-202ENST00000488683 LHX8Q68G74 356 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 GCNT7Q6ZNI0 430 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 KCTD8Q6ZWB6 473 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 TMEM179BQ7Z7N9 219 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 DHRSXQ8N5I4 330 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 C2orf15Q8WU43 125 aaKnown RBP12.45□□□□□ -0.42
CLIC4-202ENST00000488683 EGLN2Q96KS0 407 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 CDK5RAP1Q96SZ6 601 aaKnown RBP12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ADNPQ9H2P0 1102 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ZNF334Q9HCZ1 680 aaPredicted RBP12.45□□□□□ -0.42
CLIC4-202ENST00000488683 IL26Q9NPH9 171 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 ATXN10Q9UBB4 475 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 SLC8A2Q9UPR5 921 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 VPS9D1Q9Y2B5 631 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 DHRS7Q9Y394 339 aa12.45□□□□□ -0.42
CLIC4-202ENST00000488683 SPTBN5Q9NRC6 3674 aaKnown RBP12.44□□□□□ -0.42
CLIC4-202ENST00000488683 LOC730098B7Z3J9 87 aa12.44□□□□□ -0.42
CLIC4-202ENST00000488683 SEC22BO75396 215 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms