RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PDE7BQ9NP56 450 aa18.83■□□□□ 0.61
CD55-209ENST00000488171 TUBD1Q9UJT1 453 aa18.83■□□□□ 0.61
CD55-209ENST00000488171 RARRES3Q9UL19 164 aa18.83■□□□□ 0.61
CD55-209ENST00000488171 COLEC10Q9Y6Z7 277 aa18.83■□□□□ 0.61
CD55-209ENST00000488171 UBA6A0AVT1 1052 aaPredicted RBP18.82■□□□□ 0.6
CD55-209ENST00000488171 PSMA3P25788 255 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 NDUFS1P28331 727 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 ARCN1P48444 511 aaKnown RBP18.82■□□□□ 0.6
CD55-209ENST00000488171 KPNA2P52292 529 aaKnown RBP18.82■□□□□ 0.6
CD55-209ENST00000488171 HSD11B2P80365 405 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 SEPT6Q14141 434 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 DEFB109BQ30KR1 87 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 C16orf46Q6P387 395 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 PIANPQ8IYJ0 282 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 STYXQ8WUJ0 223 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 PPM1MQ96MI6 270 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 FCRL4Q96PJ5 515 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 FGF21Q9NSA1 209 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 HEBP2Q9Y5Z4 205 aa18.82■□□□□ 0.6
CD55-209ENST00000488171 MROH6A6NGR9 719 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 PSMD3O43242 534 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 ACY1Q03154 408 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 TAS2R42Q7RTR8 314 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 RNF10Q8N5U6 811 aaKnown RBP18.81■□□□□ 0.6
CD55-209ENST00000488171 CLDN19Q8N6F1 224 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 ACVR1CQ8NER5 493 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 OR4E2Q8NGC2 313 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 TRIM4Q9C037 500 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 LHX9Q9NQ69 397 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 PADI1Q9ULC6 663 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 LIASO43766 372 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 ZBTB11O95625 1053 aaPredicted RBP18.81■□□□□ 0.6
CD55-209ENST00000488171 MT-ND3P03897 115 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 FURINP09958 794 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 CCNYL3P0C7X3 344 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 POLR2CP19387 275 aaPredicted RBP18.81■□□□□ 0.6
CD55-209ENST00000488171 PDHA2P29803 388 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 ARL4DP49703 201 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 CACNG1Q06432 222 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 KRT33BQ14525 404 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 OASLQ15646 514 aaKnown RBP18.81■□□□□ 0.6
CD55-209ENST00000488171 DBN1Q16643 649 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 ARMC6Q6NXE6 501 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 FBXO38Q6PIJ6 1188 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 ATG14Q6ZNE5 492 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 BPHLQ86WA6 291 aaPredicted RBP18.81■□□□□ 0.6
CD55-209ENST00000488171 CARFQ8N187 725 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 CT55Q8WUE5 264 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 NRTNQ99748 197 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 AKIRIN1Q9H9L7 192 aaPredicted RBP18.81■□□□□ 0.6
CD55-209ENST00000488171 POMT2Q9UKY4 750 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 PCDHGA6Q9Y5G7 932 aa18.81■□□□□ 0.6
CD55-209ENST00000488171 CCDC78A2IDD5 438 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 NTRK1P04629 796 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 PREPP48147 710 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 CD151P48509 253 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 GPR19Q15760 415 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 CCDC38Q502W7 563 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 LINC00523Q86TU6 105 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 PTRH1Q86Y79 214 aaKnown RBP18.8■□□□□ 0.6
CD55-209ENST00000488171 OR52K1Q8NGK4 314 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 APOBEC4Q8WW27 367 aaKnown RBP18.8■□□□□ 0.6
CD55-209ENST00000488171 ZNF501Q96CX3 271 aaPredicted RBP18.8■□□□□ 0.6
CD55-209ENST00000488171 FERD3LQ96RJ6 166 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 VPS37BQ9H9H4 285 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 ETNK1Q9HBU6 452 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 KCND3Q9UK17 655 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 BTRCQ9Y297 605 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 PCDHB3Q9Y5E6 796 aa18.8■□□□□ 0.6
CD55-209ENST00000488171 OR51F1A6NGY5 319 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 KATNA1O75449 491 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 WISP1O95388 367 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 MSNP26038 577 aaKnown RBP18.79■□□□□ 0.6
CD55-209ENST00000488171 STIP1P31948 543 aaKnown RBP18.79■□□□□ 0.6
CD55-209ENST00000488171 TUBB4BP68371 445 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 RPA4Q13156 261 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 DNASE1L3Q13609 305 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 TUBB2AQ13885 445 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 ERV3-1Q14264 604 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 PHC3Q8NDX5 983 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 LCN9Q8WX39 176 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 RUFY1Q96T51 708 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 TUBB2BQ9BVA1 445 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 SRMSQ9H3Y6 488 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 SMARCAL1Q9NZC9 954 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 KCNMB2Q9Y691 235 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 PRSS21Q9Y6M0 314 aa18.79■□□□□ 0.6
CD55-209ENST00000488171 TLN1Q9Y490 2541 aaKnown RBP18.78■□□□□ 0.6
CD55-209ENST00000488171 ERI2A8K979 691 aaKnown RBP18.78■□□□□ 0.6
CD55-209ENST00000488171 IFRD1O00458 451 aaPredicted RBP18.78■□□□□ 0.6
CD55-209ENST00000488171 BTN3A3O00478 584 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 CREG1O75629 220 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 SUN1O94901 812 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 AP2A2O94973 939 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 GSTM1P09488 218 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 FOXN2P32314 431 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 GSTM4Q03013 218 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 CDH17Q12864 832 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 PRKAA1Q13131 559 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 BOP1Q14137 746 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms