RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PREPP48147 710 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 CSRP3P50461 194 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 ILF2Q12905 390 aaKnown RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 BNIP3Q12983 259 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 ZKSCAN8Q15776 578 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 INSCQ1MX18 579 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 ZNF423Q2M1K9 1284 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 HLA-BQ31612 363 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 TAOK1Q7L7X3 1001 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 RABEPKQ7Z6M1 372 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 VRK3Q8IV63 474 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 CD200R1Q8TD46 325 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 GPBAR1Q8TDU6 330 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 ISL2Q96A47 359 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 MTBPQ96DY7 904 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 PANX3Q96QZ0 392 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 TIMM29Q9BSF4 260 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 SLC13A1Q9BZW2 595 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 SLC32A1Q9H598 525 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 IL21RQ9HBE5 538 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 SNX15Q9NRS6 342 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 TRNAU1APQ9NX07 287 aaKnown RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 TRMT6Q9UJA5 497 aaKnown RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 CDYLQ9Y232 598 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 MSRB2Q9Y3D2 182 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 LOC400499M0QZD8 3231 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 FASNP49327 2511 aaKnown RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 TMEM8BA6NDV4 472 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 ARHGAP33O14559 1287 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 GPC4O75487 556 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 MT-ND3P03897 115 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 C2P06681 752 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 CTSEP14091 401 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 STMN1P16949 149 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 PDHA2P29803 388 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 SKIV2L2P42285 1042 aaKnown RBP12.52□□□□□ -0.41
HDAC6-229ENST00000486665 RXRGP48443 463 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 SERPINB8P50452 374 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 BLKP51451 505 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 SLC12A2P55011 1212 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 RAB10P61026 200 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 DMPKQ09013 629 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 HSPA14Q0VDF9 509 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 DNAJC3Q13217 504 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 BOP1Q14137 746 aaKnown RBP12.52□□□□□ -0.41
HDAC6-229ENST00000486665 GBX1Q14549 363 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 PRRT3Q5FWE3 981 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 METRNLQ641Q3 311 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 CYHR1Q6ZMK1 362 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 SH2D5Q6ZV89 423 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 OTOAQ7RTW8 1153 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 CPNE9Q8IYJ1 553 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 RIBC1Q8N443 379 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-229ENST00000486665 ZBTB2Q8N680 514 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 HM13Q8TCT9 377 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 LMX1AQ8TE12 382 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 ANKRD49Q8WVL7 239 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 TSPAN17Q96FV3 270 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 ELF4Q99607 663 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-229ENST00000486665 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 TSSK1BQ9BXA7 367 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 CENPHQ9H3R5 247 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 COG4Q9H9E3 785 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 TMBIM4Q9HC24 238 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 UCKL1Q9NWZ5 548 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 KLHL42Q9P2K6 505 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 APOBEC3BQ9UH17 382 aaKnown RBP12.52□□□□□ -0.41
HDAC6-229ENST00000486665 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
HDAC6-229ENST00000486665 PTPRBP23467 1997 aa12.52□□□□□ -0.41
HDAC6-229ENST00000486665 ADAMTS20P59510 1910 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 A0A096LPK6 155 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 GOLGA8RI6L899 631 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 RGS16O15492 202 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-229ENST00000486665 SH3BP5O60239 455 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 KCNJ13O60928 360 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 SDC3O75056 442 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 PIAS2O75928 621 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 SLCO2B1O94956 709 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 EML2O95834 649 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 TSPAN12O95859 305 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 GSTM1P09488 218 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 SLC35E2BP0CK96 405 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 KRT15P19012 456 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 CRABP2P29373 138 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 TYK2P29597 1187 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 CLCNKAP51800 687 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 ATXN3P54252 364 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-229ENST00000486665 IRF9Q00978 393 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 IL9RQ01113 521 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 GSTM4Q03013 218 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 DLG1Q12959 904 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 PDAP1Q13442 181 aaKnown RBP12.51□□□□□ -0.41
HDAC6-229ENST00000486665 TNFAIP8L3Q5GJ75 292 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 PLEKHS1Q5SXH7 462 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 UGT3A1Q6NUS8 523 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 RAPH1Q70E73 1250 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 RAB44Q7Z6P3 723 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-229ENST00000486665 SLC25A45Q8N413 288 aa12.51□□□□□ -0.41
HDAC6-229ENST00000486665 SPATA6LQ8N4H0 392 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms