RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 EFSO43281 561 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 KIF1CO43896 1103 aaKnown RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 KIF5CO60282 957 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 TERF1P54274 439 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 PPP1CAP62136 330 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 SARNPP82979 210 aaKnown RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 RPA4Q13156 261 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 SRSF6Q13247 344 aaKnown RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 PCID2Q5JVF3 399 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 CERS6Q6ZMG9 384 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 DTX1Q86Y01 620 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 RASGRP3Q8IV61 690 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 NLGN4XQ8N0W4 816 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 ACVR1CQ8NER5 493 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 NLGN4YQ8NFZ3 816 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 OR4L1Q8NH43 312 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 SNRNP27Q8WVK2 155 aaKnown RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 ZFPM2Q8WW38 1151 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 LCN9Q8WX39 176 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 PEX13Q92968 403 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 OR6C1Q96RD1 312 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 HGH1Q9BTY7 390 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 ULBP3Q9BZM4 244 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 RAB33BQ9H082 229 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 APMAPQ9HDC9 416 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 FBXO8Q9NRD0 319 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 CATSPERZQ9NTU4 200 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 HRASLS2Q9NWW9 162 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 SIDT1Q9NXL6 827 aaKnown RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 TTC7AQ9ULT0 858 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 GSAPA4D1B5 854 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 OR6C74A6NCV1 312 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 MATN2O00339 956 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 LIN7AO14910 233 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-208ENST00000486404 STK17BO94768 372 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 TPSB2P20231 275 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 ARCN1P48444 511 aaKnown RBP12.56□□□□□ -0.4
CHMP3-208ENST00000486404 GPS1Q13098 491 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 TUBB3Q13509 450 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 TMED2Q15363 201 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 TRIP13Q15645 432 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-208ENST00000486404 TPSAB1Q15661 275 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 CAPRIN2Q6IMN6 1127 aaKnown RBP12.56□□□□□ -0.4
CHMP3-208ENST00000486404 SLC35F6Q8N357 371 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 PRELID2Q8N945 189 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 SIDT2Q8NBJ9 832 aaKnown RBP12.56□□□□□ -0.4
CHMP3-208ENST00000486404 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 NKD1Q969G9 470 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 MAGOHBQ96A72 148 aaKnown RBP12.56□□□□□ -0.4
CHMP3-208ENST00000486404 STAMBPL1Q96FJ0 436 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 ELMO2Q96JJ3 720 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 FERD3LQ96RJ6 166 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 AP1M1Q9BXS5 423 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 OR52A5Q9H2C5 316 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 TRIT1Q9H3H1 467 aaKnown RBP12.56□□□□□ -0.4
CHMP3-208ENST00000486404 SRMSQ9H3Y6 488 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 MVB12BQ9H7P6 319 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 GPN2Q9H9Y4 310 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-208ENST00000486404 PDE7BQ9NP56 450 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 SOHLH2Q9NX45 425 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 LNPEPQ9UIQ6 1025 aa12.56□□□□□ -0.4
CHMP3-208ENST00000486404 MGAQ8IWI9 3026 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 TK2O00142 265 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 KDM1AO60341 852 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 KRT14P02533 472 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 ITGB6P18564 788 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 NELFEP18615 380 aaKnown RBP12.55□□□□□ -0.4
CHMP3-208ENST00000486404 PSMA3P25788 255 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 MAP4P27816 1152 aaKnown RBP12.55□□□□□ -0.4
CHMP3-208ENST00000486404 CD151P48509 253 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 NPY2RP49146 381 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 TTPAP49638 278 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 SH3BP2P78314 561 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 CRADDP78560 199 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 CDK16Q00536 496 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 ACVR1Q04771 509 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 IL11RAQ14626 422 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 BRD3Q15059 726 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 CASC4Q6P4E1 433 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 PPP1R3BQ86XI6 285 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 KMT5CQ86Y97 462 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 RASGEF1CQ8N431 466 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 ESX1Q8N693 406 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 LSM14AQ8ND56 463 aaKnown RBP12.55□□□□□ -0.4
CHMP3-208ENST00000486404 OR4E2Q8NGC2 313 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 MS4A14Q96JA4 679 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 ZNF778Q96MU6 729 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 ARHGAP9Q9BRR9 750 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 FANCEQ9HB96 536 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 CHRAC1Q9NRG0 131 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 TRMT1Q9NXH9 659 aaKnown RBP12.55□□□□□ -0.4
CHMP3-208ENST00000486404 SAMD15Q9P1V8 674 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 PRSS21Q9Y6M0 314 aa12.55□□□□□ -0.4
CHMP3-208ENST00000486404 IGHV5-51A0A0C4DH38 117 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 PFDN6O15212 129 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 MAP3K7O43318 606 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 OR1I1O60431 355 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 ZBTB11O95625 1053 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms