RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 GSDMCQ9BYG8 508 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 DERL2Q9GZP9 239 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 SMOC1Q9H4F8 434 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 IL21RQ9HBE5 538 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 SYTL2Q9HCH5 934 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 GPAMQ9HCL2 828 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 UCKL1Q9NWZ5 548 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 SPASTQ9UBP0 616 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 MOSPD1Q9UJG1 213 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 KCNK6Q9Y257 313 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 ACOT9Q9Y305 439 aa15.5■□□□□ 0.07
APOE-205ENST00000485628 LNP1A1A4G5 178 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 KHNYNO15037 678 aaKnown RBP15.49■□□□□ 0.07
APOE-205ENST00000485628 SCAMP1O15126 338 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 YY2O15391 372 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 RGS16O15492 202 aaPredicted RBP15.49■□□□□ 0.07
APOE-205ENST00000485628 YKT6O15498 198 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 AQP9O43315 295 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 PCDHGA12O60330 932 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 LMNAP02545 664 aaKnown RBP15.49■□□□□ 0.07
APOE-205ENST00000485628 MT-ND3P03897 115 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 CFIP05156 583 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 MYZAPP0CAP1 466 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 ZNF883P0CG24 379 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 PYGBP11216 843 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 ENGP17813 658 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 VCLP18206 1134 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 EPHA8P29322 1005 aaPredicted RBP15.49■□□□□ 0.07
APOE-205ENST00000485628 PREPP48147 710 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 IL2P60568 153 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 HSPA14Q0VDF9 509 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 ILF3Q12906 894 aaKnown RBP eCLIP15.49■□□□□ 0.07
APOE-205ENST00000485628 BNIP3Q12983 259 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 CLCA4Q14CN2 919 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 ELOCQ15369 112 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 UAP1L1Q3KQV9 507 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 TTLL9Q3SXZ7 439 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 AGBL2Q5U5Z8 902 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 LCA5Q86VQ0 697 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 ASB11Q8WXH4 323 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 DLG3Q92796 817 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 TMEM159Q96B96 161 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 SSU72Q9NP77 194 aaKnown RBP15.49■□□□□ 0.07
APOE-205ENST00000485628 FAM86C1Q9NVL1 165 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 DNAAF2Q9NVR5 837 aaKnown RBP15.49■□□□□ 0.07
APOE-205ENST00000485628 SENP1Q9P0U3 644 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 SCHIP1Q9P0W5 487 aaPredicted RBP15.49■□□□□ 0.07
APOE-205ENST00000485628 TAAR2Q9P1P5 351 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 IKZF3Q9UKT9 509 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 DNAJC16Q9Y2G8 782 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 WDR87Q6ZQQ6 2873 aa15.49■□□□□ 0.07
APOE-205ENST00000485628 CCDC189A1A4V9 331 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 TARM1B6A8C7 271 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 H3BM21 787 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 CDX4O14627 284 aaPredicted RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 TYROBPO43914 113 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 PSIP1O75475 530 aaKnown RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 KLHL2O95198 593 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 CCDC166P0CW27 439 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 CD1DP15813 335 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 CREB1P16220 341 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 KRT15P19012 456 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 SAT1P21673 171 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 IDSP22304 550 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 PBLDP30039 288 aaPredicted RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 ACTR1BP42025 376 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 ARRB1P49407 418 aaPredicted RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 SLC12A2P55011 1212 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 ACTR1AP61163 376 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 IRF9Q00978 393 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 C1orf61Q13536 156 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 BOP1Q14137 746 aaKnown RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 CCDC6Q16204 474 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 TTMPQ5BVD1 217 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 TCEAL6Q6IPX3 200 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 LRRC8EQ6NSJ5 796 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 IYDQ6PHW0 289 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 ISCA2Q86U28 154 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 PDZD3Q86UT5 571 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 NAGSQ8N159 534 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 BANPQ8N9N5 519 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 FBXO15Q8NCQ5 510 aaPredicted RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 TCEAL3Q969E4 200 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 NXNL1Q96CM4 212 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 RMDN2Q96LZ7 410 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 NUSAP1Q9BXS6 441 aaKnown RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 TWSG1Q9GZX9 223 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 GAREM1Q9H706 876 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 SARS2Q9NP81 518 aaKnown RBP15.48■□□□□ 0.07
APOE-205ENST00000485628 PARD6AQ9NPB6 346 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 PRDM8Q9NQV8 689 aa15.48■□□□□ 0.07
APOE-205ENST00000485628 CER1O95813 267 aa15.47■□□□□ 0.07
APOE-205ENST00000485628 GSTA1P08263 222 aa15.47■□□□□ 0.07
APOE-205ENST00000485628 LTA4HP09960 611 aaKnown RBP15.47■□□□□ 0.07
APOE-205ENST00000485628 SBK3P0C264 359 aa15.47■□□□□ 0.07
APOE-205ENST00000485628 F3P13726 295 aa15.47■□□□□ 0.07
APOE-205ENST00000485628 CTSEP14091 401 aa15.47■□□□□ 0.07
APOE-205ENST00000485628 XRCC1P18887 633 aaPredicted RBP15.47■□□□□ 0.07
APOE-205ENST00000485628 KRT4P19013 534 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms