RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 NCDNQ9UBB6 729 aa17.21■□□□□ 0.35
CHMP3-207ENST00000485465 TBC1D29Q9UFV1 150 aa17.21■□□□□ 0.35
CHMP3-207ENST00000485465 CSNK1G3Q9Y6M4 447 aa17.21■□□□□ 0.35
CHMP3-207ENST00000485465 GOLGA8RI6L899 631 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 YY2O15391 372 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 OPA1O60313 960 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 TSPAN12O95859 305 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 CCDC166P0CW27 439 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 PYGBP11216 843 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 RPL10P27635 214 aaKnown RBP17.2■□□□□ 0.34
CHMP3-207ENST00000485465 EPHA8P29322 1005 aaPredicted RBP17.2■□□□□ 0.34
CHMP3-207ENST00000485465 GMPRP36959 345 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 SLC26A3P40879 764 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 IRF9Q00978 393 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 IL9RQ01113 521 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 SEPT7Q16181 437 aaKnown RBP17.2■□□□□ 0.34
CHMP3-207ENST00000485465 AGAP9Q5VTM2 703 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 LRRC8EQ6NSJ5 796 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 WASH2PQ6VEQ5 465 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 CYHR1Q6ZMK1 362 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 SH2D5Q6ZV89 423 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 NEK10Q6ZWH5 1172 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 TBC1D1Q86TI0 1168 aaPredicted RBP17.2■□□□□ 0.34
CHMP3-207ENST00000485465 SLC25A45Q8N413 288 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 OR2I1PQ8NGU4 316 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 PDLIM5Q96HC4 596 aaKnown RBP17.2■□□□□ 0.34
CHMP3-207ENST00000485465 SH3GL2Q99962 352 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 WWP1Q9H0M0 922 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 STMN4Q9H169 189 aaPredicted RBP17.2■□□□□ 0.34
CHMP3-207ENST00000485465 WASH6PQ9NQA3 447 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 PCMTD2Q9NV79 361 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 TSR3Q9UJK0 312 aaKnown RBP17.2■□□□□ 0.34
CHMP3-207ENST00000485465 PCOLCE2Q9UKZ9 415 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 PSMD13Q9UNM6 376 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 WDR37Q9Y2I8 494 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 PIKFYVEQ9Y2I7 2098 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 USP34Q70CQ2 3546 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 CACNA1HO95180 2353 aa17.2■□□□□ 0.34
CHMP3-207ENST00000485465 PDZK1P1A8MUH7 402 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 PROB1E7EW31 1015 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 LMO7DNF2Z398 122 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 LRP3O75074 770 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 EML2O95834 649 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 SLC35G4P0C7Q5 338 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 MPC1LP0DKB6 136 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 CCNFP41002 786 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 CCT8P50990 548 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 ATXN3P54252 364 aaPredicted RBP17.19■□□□□ 0.34
CHMP3-207ENST00000485465 SPEM2Q0P670 501 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 DLG1Q12959 904 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 ABRQ12979 859 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 SF3A2Q15428 464 aaKnown RBP17.19■□□□□ 0.34
CHMP3-207ENST00000485465 UAP1L1Q3KQV9 507 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 CAPRIN2Q6IMN6 1127 aaKnown RBP17.19■□□□□ 0.34
CHMP3-207ENST00000485465 LVRNQ6Q4G3 990 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 ABRAXAS1Q6UWZ7 409 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 KANSL1Q7Z3B3 1105 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 PIWIL4Q7Z3Z4 852 aaKnown RBP17.19■□□□□ 0.34
CHMP3-207ENST00000485465 PDZD3Q86UT5 571 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 SRRM1Q8IYB3 904 aaKnown RBP17.19■□□□□ 0.34
CHMP3-207ENST00000485465 CENPLQ8N0S6 344 aaPredicted RBP17.19■□□□□ 0.34
CHMP3-207ENST00000485465 MYO1HQ8N1T3 1032 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 SPATA6LQ8N4H0 392 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 FAM46DQ8NEK8 389 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 SAP25Q8TEE9 199 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 PKNOX2Q96KN3 472 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 RMDN2Q96LZ7 410 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 DERL2Q9GZP9 239 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 IGSF5Q9NSI5 407 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 SENP1Q9P0U3 644 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 DOLKQ9UPQ8 538 aa17.19■□□□□ 0.34
CHMP3-207ENST00000485465 TP53BP1Q12888 1972 aaPredicted RBP17.19■□□□□ 0.34
CHMP3-207ENST00000485465 LNP1A1A4G5 178 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 A6NCN8 305 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 KLHL2O95198 593 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 ANXA6P08133 673 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 LTA4HP09960 611 aaKnown RBP17.18■□□□□ 0.34
CHMP3-207ENST00000485465 COL6A2P12110 1019 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 BRAFP15056 766 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 KRT4P19013 534 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 ACADLP28330 430 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 SLC18A2Q05940 514 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 CSHL1Q14406 222 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 CLCA4Q14CN2 919 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 CSRP2Q16527 193 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 AGBL2Q5U5Z8 902 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 CLEC14AQ86T13 490 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 C4orf33Q8N1A6 199 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 MINDY1Q8N5J2 469 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 GOLGA6L1Q8N7Z2 621 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
CHMP3-207ENST00000485465 KCTD4Q8WVF5 259 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 SKA2Q8WVK7 121 aaPredicted RBP17.18■□□□□ 0.34
CHMP3-207ENST00000485465 ARL8AQ96BM9 186 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 NXNL1Q96CM4 212 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 SEMA4GQ9NTN9 838 aa17.18■□□□□ 0.34
CHMP3-207ENST00000485465 SCHIP1Q9P0W5 487 aaPredicted RBP17.18■□□□□ 0.34
CHMP3-207ENST00000485465 NOVA2Q9UNW9 492 aaKnown RBP17.18■□□□□ 0.34
CHMP3-207ENST00000485465 RUVBL2Q9Y230 463 aaKnown RBP17.18■□□□□ 0.34
CHMP3-207ENST00000485465 VPS13AQ96RL7 3174 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms