RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 PDSS1Q5T2R2 415 aa8.33□□□□□ -1.08
CUL3-209ENST00000481135 NAGSQ8N159 534 aa8.33□□□□□ -1.08
CUL3-209ENST00000481135 METTL27Q8N6F8 245 aaPredicted RBP8.33□□□□□ -1.08
CUL3-209ENST00000481135 ZBTB8BQ8NAP8 495 aaPredicted RBP8.33□□□□□ -1.08
CUL3-209ENST00000481135 OR2AJ1Q8NGZ0 328 aa8.33□□□□□ -1.08
CUL3-209ENST00000481135 SLX1AQ9BQ83 275 aa8.33□□□□□ -1.08
CUL3-209ENST00000481135 POLR3CQ9BUI4 534 aaPredicted RBP8.33□□□□□ -1.08
CUL3-209ENST00000481135 LRRC4Q9HBW1 653 aa8.33□□□□□ -1.08
CUL3-209ENST00000481135 PFDN4Q9NQP4 134 aa8.33□□□□□ -1.08
CUL3-209ENST00000481135 C5AR2Q9P296 337 aa8.33□□□□□ -1.08
CUL3-209ENST00000481135 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.33□□□□□ -1.08
CUL3-209ENST00000481135 HEPACAM2A8MVW5 462 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 TULP2O00295 520 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 LIPFP07098 398 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 FUT6P51993 359 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 POU3F1Q03052 451 aaPredicted RBP8.32□□□□□ -1.08
CUL3-209ENST00000481135 PTPRCAPQ14761 206 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 KRT39Q6A163 491 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 CAPRIN2Q6IMN6 1127 aaKnown RBP8.32□□□□□ -1.08
CUL3-209ENST00000481135 PLXDC2Q6UX71 529 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 ZMAT2Q96NC0 199 aaKnown RBP8.32□□□□□ -1.08
CUL3-209ENST00000481135 DPAGT1Q9H3H5 408 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 ABCF3Q9NUQ8 709 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 RHCGQ9UBD6 479 aa8.32□□□□□ -1.08
CUL3-209ENST00000481135 URADA6NGE7 173 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 SYNGR3O43761 229 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 TBCAO75347 108 aaKnown RBP8.31□□□□□ -1.08
CUL3-209ENST00000481135 QDPRP09417 244 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 OR2T7P0C7T2 308 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 HOXA1P49639 335 aaPredicted RBP8.31□□□□□ -1.08
CUL3-209ENST00000481135 MMP15P51511 669 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 EEF1A2Q05639 463 aaKnown RBP8.31□□□□□ -1.08
CUL3-209ENST00000481135 COG2Q14746 738 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 TNIP1Q15025 636 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 RNASEH2BQ5TBB1 312 aaKnown RBP8.31□□□□□ -1.08
CUL3-209ENST00000481135 LRCH2Q5VUJ6 765 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.31□□□□□ -1.08
CUL3-209ENST00000481135 KCTD8Q6ZWB6 473 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 CENPVQ7Z7K6 275 aaPredicted RBP8.31□□□□□ -1.08
CUL3-209ENST00000481135 SLFN11Q7Z7L1 901 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 LMO3Q8TAP4 145 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 DAZLQ92904 295 aaKnown RBP8.31□□□□□ -1.08
CUL3-209ENST00000481135 OLFM1Q99784 485 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 LMF2Q9BU23 707 aaKnown RBP8.31□□□□□ -1.08
CUL3-209ENST00000481135 NUP85Q9BW27 656 aa8.31□□□□□ -1.08
CUL3-209ENST00000481135 CNOT10Q9H9A5 744 aaKnown RBP8.31□□□□□ -1.08
CUL3-209ENST00000481135 CTAGE9A4FU28 777 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 PRAC2D3DTV9 90 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 KCNAB3O43448 404 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 CTAGE8P0CG41 777 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 FMO5P49326 533 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 ZNF41P51814 821 aaPredicted RBP8.3□□□□□ -1.08
CUL3-209ENST00000481135 ZNF132P52740 706 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 KRBOX4Q5JUW0 171 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 CTAGE4Q8IX94 777 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 GPALPP1Q8IXQ4 340 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 ZNF595Q8IYB9 648 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 MAML2Q8IZL2 1156 aaPredicted RBP8.3□□□□□ -1.08
CUL3-209ENST00000481135 L3MBTL4Q8NA19 623 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 RAB3IPQ96QF0 476 aaPredicted RBP8.3□□□□□ -1.08
CUL3-209ENST00000481135 RETREG1Q9H6L5 497 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 TUBE1Q9UJT0 475 aa8.3□□□□□ -1.08
CUL3-209ENST00000481135 SPIN1Q9Y657 262 aaPredicted RBP8.3□□□□□ -1.08
CUL3-209ENST00000481135 GCNT3O95395 438 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 DANCRP0C864 163 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 DGKAP23743 735 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 EEF1B2P24534 225 aaKnown RBP8.29□□□□□ -1.08
CUL3-209ENST00000481135 RPS18P62269 152 aaKnown RBP8.29□□□□□ -1.08
CUL3-209ENST00000481135 CAMK2DQ13557 499 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 FAM198BQ6UWH4 519 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 KRT77Q7Z794 578 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 MFN1Q8IWA4 741 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 MAB21L3Q8N8X9 362 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 POC1AQ8NBT0 407 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 ZFAND2BQ8WV99 257 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 MRPS27Q92552 414 aaKnown RBP8.29□□□□□ -1.08
CUL3-209ENST00000481135 SFXN2Q96NB2 322 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 ABHD6Q9BV23 337 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 TBC1D17Q9HA65 648 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 ZCCHC17Q9NP64 241 aaKnown RBP8.29□□□□□ -1.08
CUL3-209ENST00000481135 MBNL1Q9NR56 388 aaKnown RBP8.29□□□□□ -1.08
CUL3-209ENST00000481135 ANAPC5Q9UJX4 755 aa8.29□□□□□ -1.08
CUL3-209ENST00000481135 SMTNL1A8MU46 457 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 MEIS2O14770 477 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 DIAPH2O60879 1101 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 CKMT2P17540 419 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 TKTP29401 623 aaKnown RBP8.28□□□□□ -1.08
CUL3-209ENST00000481135 DVL1P1P54792 670 aaPredicted RBP8.28□□□□□ -1.08
CUL3-209ENST00000481135 RPL24P83731 157 aaKnown RBP8.28□□□□□ -1.08
CUL3-209ENST00000481135 SIRPB2Q5JXA9 342 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 STXBP5Q5T5C0 1151 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 DET1Q7L5Y6 550 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 PIWIL4Q7Z3Z4 852 aaKnown RBP8.28□□□□□ -1.08
CUL3-209ENST00000481135 SLC9B2Q86UD5 537 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 VSIG1Q86XK7 387 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 CD101Q93033 1021 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 SPDL1Q96EA4 605 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 SPATA17Q96L03 361 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 SLC25A23Q9BV35 468 aa8.28□□□□□ -1.08
CUL3-209ENST00000481135 EDEM3Q9BZQ6 932 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms