RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 NRTNQ99748 197 aa18.34■□□□□ 0.53
ABCF3-214ENST00000480562 TBL1YQ9BQ87 522 aa18.34■□□□□ 0.53
ABCF3-214ENST00000480562 LUC7LQ9NQ29 371 aaKnown RBP18.34■□□□□ 0.53
ABCF3-214ENST00000480562 KCND1Q9NSA2 647 aa18.34■□□□□ 0.53
ABCF3-214ENST00000480562 SOHLH2Q9NX45 425 aa18.34■□□□□ 0.53
ABCF3-214ENST00000480562 COLEC10Q9Y6Z7 277 aa18.34■□□□□ 0.53
ABCF3-214ENST00000480562 KLHL33A6NCF5 533 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 SOWAHDA6NJG2 315 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 CPNE3O75131 537 aaKnown RBP18.33■□□□□ 0.52
ABCF3-214ENST00000480562 STK10O94804 968 aaKnown RBP18.33■□□□□ 0.52
ABCF3-214ENST00000480562 PDGFAP04085 211 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 RALBP11234 206 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 ITGALP20701 1170 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 PTPN4P29074 926 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 PRLHRP49683 370 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 CDKN1CP49918 316 aaPredicted RBP18.33■□□□□ 0.52
ABCF3-214ENST00000480562 NAP1L1P55209 391 aaKnown RBP18.33■□□□□ 0.52
ABCF3-214ENST00000480562 PDE1BQ01064 536 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 SRSF1Q07955 248 aaKnown RBP eCLIP18.33■□□□□ 0.52
ABCF3-214ENST00000480562 GPS2Q13227 327 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 UBAP2LQ14157 1087 aaKnown RBP18.33■□□□□ 0.52
ABCF3-214ENST00000480562 TMTC4Q5T4D3 741 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 SLC38A9Q8NBW4 561 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 HM13Q8TCT9 377 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 FERD3LQ96RJ6 166 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 COPS8Q99627 209 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 CCM2Q9BSQ5 444 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 TLR10Q9BXR5 811 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 GPR87Q9BY21 358 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 EFR3BQ9Y2G0 817 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 EPN1Q9Y6I3 576 aaPredicted RBP18.33■□□□□ 0.52
ABCF3-214ENST00000480562 LRRK2Q5S007 2527 aa18.33■□□□□ 0.52
ABCF3-214ENST00000480562 SPENQ96T58 3664 aaKnown RBP18.32■□□□□ 0.52
ABCF3-214ENST00000480562 CCDC66A2RUB6 948 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 SLC9B1P1A6NJY1 282 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 LDB2O43679 373 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 PRSS56P0CW18 603 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 PYGMP11217 842 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 ATP1B2P14415 290 aaPredicted RBP18.32■□□□□ 0.52
ABCF3-214ENST00000480562 CDH3P22223 829 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 NDUFS1P28331 727 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 MC4RP32245 332 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 PTPN7P35236 360 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 MLLT10P55197 1068 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 RWDD2BP57060 319 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 RPS15P62841 145 aaKnown RBP18.32■□□□□ 0.52
ABCF3-214ENST00000480562 CHAF1BQ13112 559 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 PRKAA1Q13131 559 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 SEMA5AQ13591 1074 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 IL10RAQ13651 578 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 LAMB3Q13751 1172 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 UGT8Q16880 541 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 CPZQ66K79 652 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 SNX20Q7Z614 316 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 APLFQ8IW19 511 aaPredicted RBP18.32■□□□□ 0.52
ABCF3-214ENST00000480562 LCN9Q8WX39 176 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 ALG3Q92685 438 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 DNAJC1Q96KC8 554 aaKnown RBP18.32■□□□□ 0.52
ABCF3-214ENST00000480562 CHST8Q9H2A9 424 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 COG4Q9H9E3 785 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 ANKMY1Q9P2S6 941 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 POMT2Q9UKY4 750 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 FARSAQ9Y285 508 aaKnown RBP18.32■□□□□ 0.52
ABCF3-214ENST00000480562 BTRCQ9Y297 605 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 HEBP2Q9Y5Z4 205 aa18.32■□□□□ 0.52
ABCF3-214ENST00000480562 GSAPA4D1B5 854 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 CFAP99D6REC4 459 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 HADHAP40939 763 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 LCN10Q6JVE6 187 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 SYVN1Q86TM6 617 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 PHC3Q8NDX5 983 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 ACVR1CQ8NER5 493 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 MIB2Q96AX9 1013 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 SRMSQ9H3Y6 488 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 ZDHHC3Q9NYG2 299 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 REXO2Q9Y3B8 237 aaKnown RBP18.31■□□□□ 0.52
ABCF3-214ENST00000480562 SPTBP11277 2137 aa18.31■□□□□ 0.52
ABCF3-214ENST00000480562 ARGFXA6NJG6 315 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 BTN3A3O00478 584 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 TJP3O95049 919 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 TPH1P17752 444 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 PDHA2P29803 388 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 ABRQ12979 859 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 ZRANB3Q5FWF4 1079 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 PLEKHS1Q5SXH7 462 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 FAM69BQ5VUD6 431 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 ZNF517Q6ZMY9 492 aaPredicted RBP18.3■□□□□ 0.52
ABCF3-214ENST00000480562 TAS2R42Q7RTR8 314 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 SERPINA9Q86WD7 417 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 CARFQ8N187 725 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 OR8K5Q8NH50 307 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 HEXDCQ8WVB3 486 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 THAP4Q8WY91 577 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 SEC14L1Q92503 715 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 LACRTQ9GZZ8 138 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 KLHL25Q9H0H3 589 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 OR52A5Q9H2C5 316 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 ARNT2Q9HBZ2 717 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 C1GALT1Q9NS00 363 aa18.3■□□□□ 0.52
ABCF3-214ENST00000480562 TNRC6AQ8NDV7 1962 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms