RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 H3BM21 787 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 HRO43593 1189 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 VCLP18206 1134 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 ATP5F1P24539 256 aaPredicted RBP17.21■□□□□ 0.35
UPF3A-206ENST00000480362 GNGT1P63211 74 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 CBX1P83916 185 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 FZD2Q14332 565 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 PDK4Q16654 411 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 METRNLQ641Q3 311 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 ADAMTSL2Q86TH1 951 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 IQCHQ86VS3 1027 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 DCP2Q8IU60 420 aaKnown RBP17.21■□□□□ 0.35
UPF3A-206ENST00000480362 HID1Q8IV36 788 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 C1orf216Q8TAB5 229 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 ASB11Q8WXH4 323 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 MAGEB18Q96M61 343 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 SIRPGQ9P1W8 387 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 KCNK6Q9Y257 313 aa17.21■□□□□ 0.35
UPF3A-206ENST00000480362 ABCA7Q8IZY2 2146 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 NEMP2A6NFY4 417 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 SYCE1LA8MT33 242 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 SUPT3HB4E1H0 165 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 UBXN8O00124 270 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 SMIM24O75264 130 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 SUPT3HO75486 399 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 MATN4O95460 622 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 TNFP01375 233 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 C8GP07360 202 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 TPBGLP0DKB5 382 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 MTHFD2P13995 350 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 BGNP21810 368 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 DHPSP49366 369 aaPredicted RBP17.2■□□□□ 0.34
UPF3A-206ENST00000480362 HK3P52790 923 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 DMPKQ09013 629 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 EIF2B5Q13144 721 aaKnown RBP17.2■□□□□ 0.34
UPF3A-206ENST00000480362 RPA4Q13156 261 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 CHI3L2Q15782 390 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 TUBB8Q3ZCM7 444 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 SBSNQ6UWP8 590 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 FRA10AC1Q70Z53 315 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 UBE2R2Q712K3 238 aaPredicted RBP17.2■□□□□ 0.34
UPF3A-206ENST00000480362 CFAP61Q8NHU2 1237 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 ZNF75CPQ92670 426 aaPredicted RBP17.2■□□□□ 0.34
UPF3A-206ENST00000480362 DLG3Q92796 817 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 NELL1Q92832 810 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 OR52A5Q9H2C5 316 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 DPEP2Q9H4A9 486 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 MANSC1Q9H8J5 431 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 OXSMQ9NWU1 459 aa17.2■□□□□ 0.34
UPF3A-206ENST00000480362 FAM86C2PA6NEL3 165 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 A8MT66 165 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 GFYI3L273 518 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 TLR4O00206 839 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 SLC16A5O15375 505 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 TRIM13O60858 407 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 RASGRP1O95267 797 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 FGF3P11487 239 aaPredicted RBP17.19■□□□□ 0.34
UPF3A-206ENST00000480362 ITPKAP23677 461 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 OVGP1Q12889 678 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 PHKG1Q16816 387 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 PPP1R3AQ16821 1122 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 ZNF528Q3MIS6 628 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 LYSMD4Q5XG99 296 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 PMS2CLQ68D20 193 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 LAYNQ6UX15 382 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 RASGRP3Q8IV61 690 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 TRIM42Q8IWZ5 723 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 PPP1R14CQ8TAE6 165 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 SREK1Q8WXA9 508 aaKnown RBP17.19■□□□□ 0.34
UPF3A-206ENST00000480362 FOPNLQ96NB1 174 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 SLC12A9Q9BXP2 914 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 TMEM168Q9H0V1 697 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 OSGEPL1Q9H4B0 414 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 CCDC134Q9H6E4 229 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 UTP6Q9NYH9 597 aaKnown RBP17.19■□□□□ 0.34
UPF3A-206ENST00000480362 CD274Q9NZQ7 290 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 ACSL5Q9ULC5 683 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 PSMD13Q9UNM6 376 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 OARD1Q9Y530 152 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 DGKBQ9Y6T7 804 aa17.19■□□□□ 0.34
UPF3A-206ENST00000480362 NCF1BA6NI72 391 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-206ENST00000480362 PRR19A6NJB7 356 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 NCF1CA8MVU1 366 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-206ENST00000480362 TNFRSF10AO00220 468 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 BCAT2O15382 392 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-206ENST00000480362 PSIP1O75475 530 aaKnown RBP17.18■□□□□ 0.34
UPF3A-206ENST00000480362 SP9P0CG40 484 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 GFAPP14136 432 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 NCF1P14598 390 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-206ENST00000480362 IDSP22304 550 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 LSP1P33241 339 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 CTBSQ01459 385 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 SP140Q13342 867 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 ANGPT1Q15389 498 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 TGFBIQ15582 683 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 PFKFB4Q16877 469 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 PLK5Q496M5 336 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 ZNF542PQ5EBM4 170 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 LIPMQ5VYY2 423 aa17.18■□□□□ 0.34
UPF3A-206ENST00000480362 ZCCHC23Q6ZST2 131 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms