RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ANGPTL2Q9UKU9 493 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 NEUROG3Q9Y4Z2 214 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 COLEC10Q9Y6Z7 277 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 AKAP13Q12802 2813 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 WDFY3Q8IZQ1 3526 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 IGHV1OR21-1A0A087WYE8 117 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 IQCF5A8MTL0 148 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 E5RI56 91 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 DUX1O43812 170 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 GPC4O75487 556 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 HAUS5O94927 633 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 CPNE6O95741 557 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 APOA4P06727 396 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 GSTA2P09210 222 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 ITGB6P18564 788 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 CHRM3P20309 590 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 PDHA2P29803 388 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 MAGEA4P43358 317 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 PREPP48147 710 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 SHC2P98077 582 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 MGAT5Q09328 741 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 HSPA14Q0VDF9 509 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 TMED2Q15363 201 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 AMZ1Q400G9 498 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 PLEKHS1Q5SXH7 462 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 TEDDM1Q5T9Z0 273 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 TRMT10BQ6PF06 316 aaKnown RBP10.58□□□□□ -0.72
ATG4B-219ENST00000479941 OTOAQ7RTW8 1153 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 PDZD3Q86UT5 571 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 PIM3Q86V86 326 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 KRT222Q8N1A0 295 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 SPDYE1Q8NFV5 336 aaPredicted RBP10.58□□□□□ -0.72
ATG4B-219ENST00000479941 OR10G6Q8NH81 332 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 LKAAEAR1Q8TD35 194 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 IFT81Q8WYA0 676 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 TFGQ92734 400 aaPredicted RBP10.58□□□□□ -0.72
ATG4B-219ENST00000479941 KCNJ9Q92806 393 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 AHCYL2Q96HN2 611 aaKnown RBP10.58□□□□□ -0.72
ATG4B-219ENST00000479941 RMDN2Q96LZ7 410 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 DPYSL5Q9BPU6 564 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 SYNDIG1Q9H7V2 258 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 LATS2Q9NRM7 1088 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 NSMCE4AQ9NXX6 385 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 ZFATQ9P243 1243 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 MSRB2Q9Y3D2 182 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 UNC13CQ8NB66 2214 aa10.58□□□□□ -0.72
ATG4B-219ENST00000479941 D6RAR5 112 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 TMX2-CTNND1H3BSU7 103 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 NIPSNAP2O75323 286 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 SPAG6O75602 509 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 SLCO2B1O94956 709 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 TOP3BO95985 862 aaKnown RBP10.57□□□□□ -0.72
ATG4B-219ENST00000479941 AHSGP02765 367 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 CD1CP29017 333 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 SSTR1P30872 391 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 CLDN6P56747 220 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 MPP1Q00013 466 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 ILF2Q12905 390 aaKnown RBP10.57□□□□□ -0.72
ATG4B-219ENST00000479941 TARDBPQ13148 414 aaKnown RBP eCLIP10.57□□□□□ -0.72
ATG4B-219ENST00000479941 CUL1Q13616 776 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 GPR18Q14330 331 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 KRT33BQ14525 404 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 BRD3Q15059 726 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 ISXQ2M1V0 245 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 CNSTQ6PJW8 725 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 NAPRTQ6XQN6 538 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 C3orf62Q6ZUJ4 267 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 SLC26A11Q86WA9 606 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 ZNF761Q86XN6 746 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-219ENST00000479941 IFT20Q8IY31 132 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 SLC22A15Q8IZD6 547 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 CDKL2Q92772 493 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 C9orf72Q96LT7 481 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 TBC1D10AQ9BXI6 508 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 MVB12BQ9H7P6 319 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 KLHL42Q9P2K6 505 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 KLK13Q9UKR3 277 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 CORO1CQ9ULV4 474 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-219ENST00000479941 CDYLQ9Y232 598 aa10.57□□□□□ -0.72
ATG4B-219ENST00000479941 CFAP20Q9Y6A4 193 aaKnown RBP10.57□□□□□ -0.72
ATG4B-219ENST00000479941 FREM2Q5SZK8 3169 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 PRAMEF33A0A0G2JMD5 474 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 TCRBV9S1A1TA0A576 114 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 FAM149AA5PLN7 773 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 CASC3O15234 703 aaKnown RBP10.56□□□□□ -0.72
ATG4B-219ENST00000479941 CSO75390 466 aaKnown RBP10.56□□□□□ -0.72
ATG4B-219ENST00000479941 VPS26AO75436 327 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 UBXN7O94888 489 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 RHOXF2BP0C7M4 288 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 AMD1P17707 334 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 SPINK2P20155 84 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 CD9P21926 228 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 ACADLP28330 430 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 GABRB3P28472 473 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 ATP5DP30049 168 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 SKIV2L2P42285 1042 aaKnown RBP10.56□□□□□ -0.72
ATG4B-219ENST00000479941 PPM1FP49593 454 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-219ENST00000479941 CLCN7P51798 805 aa10.56□□□□□ -0.72
ATG4B-219ENST00000479941 CSE1LP55060 971 aaKnown RBP10.56□□□□□ -0.72
ATG4B-219ENST00000479941 TUBB4BP68371 445 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms