RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 B4GAT1O43505 415 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 TYRP1P17643 537 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 CCR7P32248 378 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 CSF2RBP32927 897 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 ABCG1P45844 678 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 GPR3P46089 330 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 SHC2P98077 582 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 HSPA14Q0VDF9 509 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 NR1D2Q14995 579 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 TMED2Q15363 201 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 C3orf38Q5JPI3 329 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 SPANXN3Q5MJ09 141 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 CTSL3PQ5NE16 218 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 SNAP47Q5SQN1 464 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 CDCP2Q5VXM1 449 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 WASH2PQ6VEQ5 465 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 CCNI2Q6ZMN8 369 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-215ENST00000478531 TMPRSS9Q7Z410 1059 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 PIM3Q86V86 326 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 EFCAB3Q8N7B9 438 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 DCBLD1Q8N8Z6 715 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 WDR48Q8TAF3 677 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 CALML6Q8TD86 181 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 SKA2Q8WVK7 121 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-215ENST00000478531 TMEM159Q96B96 161 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 SH3KBP1Q96B97 665 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 LRRC39Q96DD0 335 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 CERS2Q96G23 380 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 ATXN7L3BQ96GX2 97 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 HGH1Q9BTY7 390 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 CARD6Q9BX69 1037 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-215ENST00000478531 P2RY12Q9H244 342 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 OR52A5Q9H2C5 316 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 SLC40A1Q9NP59 571 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 WASH6PQ9NQA3 447 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 POT1Q9NUX5 634 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 TMEM9Q9P0T7 183 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 KLHL3Q9UH77 587 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 VPS9D1Q9Y2B5 631 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 MSRB2Q9Y3D2 182 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 TEX264Q9Y6I9 313 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 FAM169AQ9Y6X4 670 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 NIPSNAP2O75323 286 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 UBXN7O94888 489 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CPNE6O95741 557 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 S1PR4O95977 384 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 APOA4P06727 396 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 GSTM1P09488 218 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CHRM3P20309 590 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 RPS3P23396 243 aaKnown RBP eCLIP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CD1CP29017 333 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CARSP49589 748 aaKnown RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 GPLD1P80108 840 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 GSTM4Q03013 218 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 RPA4Q13156 261 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ISXQ2M1V0 245 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF658BQ4V348 819 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 TRMT10BQ6PF06 316 aaKnown RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 TMEM26Q6ZUK4 368 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 OTOAQ7RTW8 1153 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 LRRC6Q86X45 466 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CNPY4Q8N129 248 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 MMGT1Q8N4V1 131 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CEP112Q8N8E3 955 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 RCBTB1Q8NDN9 531 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CFAP61Q8NHU2 1237 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 GABPB2Q8TAK5 448 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 GSDMBQ8TAX9 411 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PYROXD1Q8WU10 500 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 IFT81Q8WYA0 676 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 NCSTNQ92542 709 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 RSC1A1Q92681 617 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ART4Q93070 314 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 BIRC8Q96P09 236 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PANX3Q96QZ0 392 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 FERD3LQ96RJ6 166 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 TCF12Q99081 682 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CCDC68Q9H2F9 335 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 SEMA6CQ9H3T2 930 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PLAC1Q9HBJ0 212 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 INTS10Q9NVR2 710 aaKnown RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 FBXO5Q9UKT4 447 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ENTPD2Q9Y5L3 495 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 AHCTF1Q8WYP5 2266 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ADAMTS20P59510 1910 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PMS2P1A4D2B8 440 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 LILRA5A6NI73 299 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 C1QTNF9BB2RNN3 333 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 E7ESA3 106 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ESR1P03372 595 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 MPOP05164 745 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PROS1P07225 676 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 RHOXF2BP0C7M4 288 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 C1QTNF9P0C862 333 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 HOXB3P14651 431 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 AMD1P17707 334 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CAPZBP47756 277 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 EPHA4P54764 986 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms