RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 EGLN1Q9GZT9 426 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 RANBP17Q9H2T7 1088 aaKnown RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 PDRG1Q9NUG6 133 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 ABCF3Q9NUQ8 709 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 RCOR1Q9UKL0 485 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 NAP1L2Q9ULW6 460 aaPredicted RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 FAM96BQ9Y3D0 163 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 ROBO3Q96MS0 1386 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 TRPM7Q96QT4 1865 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 SIPA1L1O43166 1804 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 MYH4Q9Y623 1939 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 DOCK1Q14185 1865 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 A0A1W2PPH5 198 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 CCDC69A6NI79 296 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 SEC14L2O76054 403 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 ASNSP08243 561 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 ATP1A3P13637 1013 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 ETFAP13804 333 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 DDX5P17844 614 aaKnown RBP3.95□□□□□ -1.78
UBR3-209ENST00000477461 CDAP32320 146 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 SHMT1P34896 483 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 EIF2S3P41091 472 aaKnown RBP3.95□□□□□ -1.78
UBR3-209ENST00000477461 ERVK11-1P61568 191 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 RPL7AP62424 266 aaKnown RBP3.95□□□□□ -1.78
UBR3-209ENST00000477461 GABPAQ06546 454 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 BECN1Q14457 450 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 WTAPQ15007 396 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 STOX1Q6ZVD7 989 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 TMEM179Q6ZVK1 233 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 CHST3Q7LGC8 479 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 R3HCC1LQ7Z5L2 792 aaKnown RBP3.95□□□□□ -1.78
UBR3-209ENST00000477461 HSCBQ8IWL3 235 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 TMTC2Q8N394 836 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 PAF1Q8N7H5 531 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 PPHLN1Q8NEY8 458 aaKnown RBP3.95□□□□□ -1.78
UBR3-209ENST00000477461 SLC20A1Q8WUM9 679 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 ZNF570Q96NI8 536 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 MAP7D2Q96T17 732 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 STRA6Q9BX79 667 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 HEMGNQ9BXL5 484 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 SLC25A18Q9H1K4 315 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 PDCL3Q9H2J4 239 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 SH2D4AQ9H788 454 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 ZNF696Q9H7X3 374 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 KAT14Q9H8E8 782 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 CNGB3Q9NQW8 809 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 ASAH2Q9NR71 780 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 C1RLQ9NZP8 487 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 ISY1Q9ULR0 285 aaKnown RBP3.95□□□□□ -1.78
UBR3-209ENST00000477461 STX8Q9UNK0 236 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 WDR19Q8NEZ3 1342 aa3.95□□□□□ -1.78
UBR3-209ENST00000477461 A0A1W2PRG0 241 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 NPIPB15A6NHN6 443 aaPredicted RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 LRRC53A6NM62 1247 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 SH2B2O14492 632 aaPredicted RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 CAPN9O14815 690 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 SEC14L5O43304 696 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 RFPL2O75678 378 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 TOMM70O94826 608 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 RTN3O95197 1032 aaPredicted RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 CELF2O95319 508 aaKnown RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 GH2P01242 217 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 CLEC3BP05452 202 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 HSP90AA1P07900 732 aaKnown RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 TOP1P11387 765 aaKnown RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 HLA-DOBP13765 273 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 AKR1B1P15121 316 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 TIMP3P35625 211 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 CDKN1AP38936 164 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 FKBP1BP68106 108 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 GRIK3Q13003 919 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 CCNG2Q16589 344 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 CDC73Q6P1J9 531 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 TATDN1Q6P1N9 297 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 KRBA2Q6ZNG9 492 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 DHX40Q8IX18 779 aaKnown RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 DIS3L2Q8IYB7 885 aaKnown RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 SCYL3Q8IZE3 742 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 SCCPDHQ8NBX0 429 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 CADM4Q8NFZ8 388 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 METTL6Q8TCB7 284 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 DUSP19Q8WTR2 217 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 ALG14Q96F25 216 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 TCEANC2Q96MN5 208 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 BBS4Q96RK4 519 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 LRRC2Q9BYS8 371 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 GFRA4Q9GZZ7 299 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 DNAJC18Q9H819 358 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 MAGEE1Q9HCI5 957 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 TCP11L1Q9NUJ3 509 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 TINAGQ9UJW2 476 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 TCF19Q9Y242 345 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 LSM4Q9Y4Z0 139 aaKnown RBP3.94□□□□□ -1.78
UBR3-209ENST00000477461 PAPPA2Q9BXP8 1791 aa3.94□□□□□ -1.78
UBR3-209ENST00000477461 PLIN4Q96Q06 1357 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 OTOFQ9HC10 1997 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 A0A087X0M5 115 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 KLF18A0A0U1RQI7 1052 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms