RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TMEM63AO94886 807 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 PDHA2P29803 388 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 PPP1CAP62136 330 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 MC2RQ01718 297 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 BOP1Q14137 746 aaKnown RBP23.43■■□□□ 1.34
CPNE1-223ENST00000475146 BRD3Q15059 726 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 CES3Q6UWW8 571 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 LDB1Q86U70 411 aaPredicted RBP23.43■■□□□ 1.34
CPNE1-223ENST00000475146 OOSP2Q86WS3 158 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 CTRCQ99895 268 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 KIFC1Q9BW19 673 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 ASPSCR1Q9BZE9 553 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 MRM3Q9HC36 420 aaKnown RBP23.43■■□□□ 1.34
CPNE1-223ENST00000475146 MARCH4Q9P2E8 410 aaPredicted RBP23.43■■□□□ 1.34
CPNE1-223ENST00000475146 EPHA6Q9UF33 1036 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 PIKFYVEQ9Y2I7 2098 aa23.43■■□□□ 1.34
CPNE1-223ENST00000475146 PTPRQQ9UMZ3 2332 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 LIN7AO14910 233 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-223ENST00000475146 TOX3O15405 576 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-223ENST00000475146 CD3EAPO15446 510 aaKnown RBP23.42■■□□□ 1.34
CPNE1-223ENST00000475146 AVILO75366 819 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 ITGB6P18564 788 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 CD151P48509 253 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 PPP1R7Q15435 360 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 ARMC6Q6NXE6 501 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 CASC4Q6P4E1 433 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 GPR155Q7Z3F1 870 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 PRSS42Q7Z5A4 293 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 MFSD3Q96ES6 412 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 CAPZA3Q96KX2 299 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 RAB33BQ9H082 229 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 ZNF768Q9H5H4 540 aaKnown RBP23.42■■□□□ 1.34
CPNE1-223ENST00000475146 SOX13Q9UN79 622 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 NEU2Q9Y3R4 380 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 AHCTF1Q8WYP5 2266 aa23.42■■□□□ 1.34
CPNE1-223ENST00000475146 FAM208BQ5VWN6 2430 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 OR5K3A6NET4 321 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 STMND1H3BQB6 276 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 GOLGA8MH3BSY2 632 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 TTPAP49638 278 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 FOXM1Q08050 763 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 ARHGAP40Q5TG30 622 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 CEACAM20Q6UY09 585 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 NAPRTQ6XQN6 538 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 ACVR1CQ8NER5 493 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 TEFMQ96QE5 360 aaKnown RBP23.41■■□□□ 1.34
CPNE1-223ENST00000475146 CCNL2Q96S94 520 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-223ENST00000475146 NAPGQ99747 312 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-223ENST00000475146 TSSK1BQ9BXA7 367 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 DDX47Q9H0S4 455 aaKnown RBP23.41■■□□□ 1.34
CPNE1-223ENST00000475146 APMAPQ9HDC9 416 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 HRASLS2Q9NWW9 162 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 SAMD15Q9P1V8 674 aa23.41■■□□□ 1.34
CPNE1-223ENST00000475146 DSPP15924 2871 aaKnown RBP23.4■■□□□ 1.34
CPNE1-223ENST00000475146 OR6C74A6NCV1 312 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 VAPBO95292 243 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 ARCN1P48444 511 aaKnown RBP23.4■■□□□ 1.34
CPNE1-223ENST00000475146 VAC14Q08AM6 782 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 DNTTIP2Q5QJE6 756 aaKnown RBP23.4■■□□□ 1.34
CPNE1-223ENST00000475146 CCDC81Q6ZN84 652 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 CAND1Q86VP6 1230 aaKnown RBP23.4■■□□□ 1.34
CPNE1-223ENST00000475146 MPP5Q8N3R9 675 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 PHC3Q8NDX5 983 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 MCUQ8NE86 351 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 OR4E2Q8NGC2 313 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 TFGQ92734 400 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-223ENST00000475146 HGH1Q9BTY7 390 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 MVB12BQ9H7P6 319 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 XAB2Q9HCS7 855 aaKnown RBP23.4■■□□□ 1.34
CPNE1-223ENST00000475146 FBXO8Q9NRD0 319 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 SIDT1Q9NXL6 827 aaKnown RBP23.4■■□□□ 1.34
CPNE1-223ENST00000475146 CFAP47Q6ZTR5 3102 aa23.4■■□□□ 1.34
CPNE1-223ENST00000475146 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.39■■□□□ 1.33
CPNE1-223ENST00000475146 PRMT5O14744 637 aaPredicted RBP23.39■■□□□ 1.33
CPNE1-223ENST00000475146 POLR1CO15160 346 aaPredicted RBP23.39■■□□□ 1.33
CPNE1-223ENST00000475146 NDUFS3O75489 264 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 ATP1A2P50993 1020 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 CSE1LP55060 971 aaKnown RBP23.39■■□□□ 1.33
CPNE1-223ENST00000475146 MANEAQ5SRI9 462 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 VASH2Q86V25 355 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 DTX1Q86Y01 620 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 LCN9Q8WX39 176 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 SERPINB12Q96P63 405 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 SRMSQ9H3Y6 488 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 ASIC3Q9UHC3 531 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 SSUH2Q9Y2M2 353 aa23.39■■□□□ 1.33
CPNE1-223ENST00000475146 UBA6A0AVT1 1052 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-223ENST00000475146 MLNP12872 115 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 PAMP19021 973 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 ARNTP27540 789 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 SH3BP2P78314 561 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 PLOD1Q02809 727 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-223ENST00000475146 PRKAA1Q13131 559 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 PRKG2Q13237 762 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 SRSF6Q13247 344 aaKnown RBP23.38■■□□□ 1.33
CPNE1-223ENST00000475146 PAPD7Q5XG87 772 aaKnown RBP23.38■■□□□ 1.33
CPNE1-223ENST00000475146 PTRHD1Q6GMV3 140 aaKnown RBP23.38■■□□□ 1.33
CPNE1-223ENST00000475146 LKAAEAR1Q8TD35 194 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 KLHL6Q8WZ60 621 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 UBXN4Q92575 508 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms