RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 GPSM1Q86YR5 675 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 CRLF3Q8IUI8 442 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 SLC22A15Q8IZD6 547 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 KIRREL3Q8IZU9 778 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 MYO1HQ8N1T3 1032 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 CHCHD4Q8N4Q1 142 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 CCDC197Q8NCU1 140 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 OR2L2Q8NH16 312 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 OR14C36Q8NHC7 312 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 PIWIL2Q8TC59 973 aaKnown RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 UBTD2Q8WUN7 234 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 C10orf82Q8WW14 230 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 DLG3Q92796 817 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 EDAQ92838 391 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 TMEM237Q96Q45 408 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 C1QTNF7Q9BXJ2 289 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 ERVK-6Q9BXR3 956 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 TRIM55Q9BYV6 548 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 BTBD1Q9H0C5 482 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 PCED1AQ9H1Q7 454 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 KCNH6Q9H252 994 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 DPEP2Q9H4A9 486 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 GSTO2Q9H4Y5 243 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 STN1Q9H668 368 aaKnown RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF395Q9H8N7 513 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 RMI1Q9H9A7 625 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 GPR27Q9NS67 375 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 KCNK4Q9NYG8 393 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 NUDT4Q9NZJ9 180 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 NCKIPSDQ9NZQ3 722 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 RAPGEFL1Q9UHV5 662 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 PTBP2Q9UKA9 531 aaKnown RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 NDRG2Q9UN36 371 aaKnown RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 SLC17A4Q9Y2C5 497 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 ARL2BPQ9Y2Y0 163 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 RAP2CQ9Y3L5 183 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 ST14Q9Y5Y6 855 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 HS3ST3A1Q9Y663 406 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 TCRBV21S2A2A0A5A6 115 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 NPEPPSL1A6NEC2 478 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 MGAT4DA6NG13 374 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 LRRC72A6NJI9 287 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 FAM170BA6NMN3 283 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 SLCO1B7G3V0H7 640 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 UBXN8O00124 270 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 MATN2O00339 956 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 INPP4BO15327 924 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 FFAR2O15552 330 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 SMIM24O75264 130 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF217O75362 1048 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PSIP1O75475 530 aaKnown RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 IGHV4-34P06331 123 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 CEACAM5P06731 702 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 C8GP07360 202 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 TROVE2P10155 538 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ACADMP11310 421 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 MYCLP1P12525 358 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF8P17098 575 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ACADLP28330 430 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 HOXA6P31267 233 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ACSL1P33121 698 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 IGFALSP35858 605 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PLA2G5P39877 138 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 MAGEA9P43362 315 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 CLCNKAP51800 687 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 AP1S2P56377 157 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 KIAA1024LP59773 190 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PFN3P60673 137 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 YPEL5P62699 121 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PPP2CBP62714 309 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PPP2CAP67775 309 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ARHGAP8P85298 464 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PCDH1Q08174 1060 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PRKAA1Q13131 559 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 SGCGQ13326 291 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 INPP5AQ14642 412 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 IRF4Q15306 451 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ARL13AQ5H913 290 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF648Q5T619 568 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 FAM91A1Q658Y4 838 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 YTHDF3Q7Z739 585 aaKnown RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 HEATR4Q86WZ0 1026 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 VRK3Q8IV63 474 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 HOMEZQ8IX15 550 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 CACNA2D3Q8IZS8 1091 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 FBXO39Q8N4B4 442 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 SPEM1Q8N4L4 309 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 CAMKK1Q8N5S9 505 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PTGR2Q8N8N7 351 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 TMEM145Q8NBT3 493 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 PJA1Q8NG27 643 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 RFWD2Q8NHY2 731 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 HM13Q8TCT9 377 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF483Q8TF39 744 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 NAT14Q8WUY8 206 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 FAM136AQ96C01 138 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 BMFQ96LC9 184 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 USB1Q9BQ65 265 aaKnown RBP6.48□□□□□ -1.37
ATG4A-207ENST00000474825 ORAI3Q9BRQ5 295 aa6.48□□□□□ -1.37
ATG4A-207ENST00000474825 LGR4Q9BXB1 951 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms