RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 KLK10O43240 276 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 PDHA2P29803 388 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 ETV5P41161 510 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 GFERP55789 205 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 PLOD1Q02809 727 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 THOC5Q13769 683 aaKnown RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 SEMA3AQ14563 771 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 CACHD1Q5VU97 1274 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 IZUMO3Q5VZ72 239 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 OOSP2Q86WS3 158 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 NAT8LQ8N9F0 302 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 PHC3Q8NDX5 983 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 RSC1A1Q92681 617 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 TFGQ92734 400 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 SLCO2A1Q92959 643 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 ART4Q93070 314 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 C9orf72Q96LT7 481 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 OR52A5Q9H2C5 316 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 KIR3DX1Q9H7L2 352 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 KCND1Q9NSA2 647 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 SLC24A2Q9UI40 661 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 GNPTGQ9UJJ9 305 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 FAM237BA0A1B0GVD1 139 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 GOLGA8KD6RF30 607 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 GOLGA8TH3BQL2 631 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 DNALI1O14645 258 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 PRAMEF10O60809 474 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 APOA4P06727 396 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 FGF3P11487 239 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 ITPKBP27987 946 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 PTGIRP43119 386 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 LEPRP48357 1165 aaKnown RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 SEPHS1P49903 392 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 EIF3BP55884 814 aaKnown RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 PRKAA1Q13131 559 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 TMED2Q15363 201 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 RNF187Q5TA31 235 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 RNASEH2BQ5TBB1 312 aaKnown RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 KIAA0930Q6ICG6 404 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-203ENST00000474047 NAPRTQ6XQN6 538 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 SYT10Q6XYQ8 523 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 FAM92BQ6ZTR7 304 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 ARHGAP22Q7Z5H3 698 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 SPACA3Q8IXA5 215 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 ACVR1CQ8NER5 493 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 OR4E2Q8NGC2 313 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 LCN9Q8WX39 176 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 DPH1Q9BZG8 443 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 SRMSQ9H3Y6 488 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 MVB12BQ9H7P6 319 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 HRASLS2Q9NWW9 162 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 OCIAD1Q9NX40 245 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 PCDHB11Q9Y5F2 797 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 RPS6KL1Q9Y6S9 549 aa13.87□□□□□ -0.19
VAMP4-203ENST00000474047 MN1Q10571 1320 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-203ENST00000474047 OR6C74A6NCV1 312 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 C9P02748 559 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 ARL4DP49703 201 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 RAB15P59190 212 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 ETF1P62495 437 aaKnown RBP13.86□□□□□ -0.19
VAMP4-203ENST00000474047 HSPA14Q0VDF9 509 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 PRKG2Q13237 762 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 COL28A1Q2UY09 1125 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 ANKRD20A4Q4UJ75 823 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 DNAJC21Q5F1R6 531 aaKnown RBP13.86□□□□□ -0.19
VAMP4-203ENST00000474047 DCAF12Q5T6F0 453 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 NEPROQ6NW34 567 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 PDZD3Q86UT5 571 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 LRRC6Q86X45 466 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 ASZ1Q8WWH4 475 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 STAMBPL1Q96FJ0 436 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 PANX3Q96QZ0 392 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 TCF12Q99081 682 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 CARD6Q9BX69 1037 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 ASPSCR1Q9BZE9 553 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 ASF1AQ9Y294 204 aa13.86□□□□□ -0.19
VAMP4-203ENST00000474047 KMT2BQ9UMN6 2715 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-203ENST00000474047 BAHCC1Q9P281 2608 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 ANKRD11Q6UB99 2663 aaPredicted RBP13.85□□□□□ -0.19
VAMP4-203ENST00000474047 B4E171 279 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 KPNA5O15131 536 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 TOX3O15405 576 aaPredicted RBP13.85□□□□□ -0.19
VAMP4-203ENST00000474047 CD82P27701 267 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 FMO4P31512 558 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 TSPAN7P41732 249 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 FOXM1Q08050 763 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 DNTTIP2Q5QJE6 756 aaKnown RBP13.85□□□□□ -0.19
VAMP4-203ENST00000474047 HOOK3Q86VS8 718 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 KRT222Q8N1A0 295 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 KRT12Q99456 494 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 HGH1Q9BTY7 390 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 B3GNT4Q9C0J1 378 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 RAB33BQ9H082 229 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 TRIT1Q9H3H1 467 aaKnown RBP13.85□□□□□ -0.19
VAMP4-203ENST00000474047 EPHA6Q9UF33 1036 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 LHX6Q9UPM6 363 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 VPS9D1Q9Y2B5 631 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 BPTFQ12830 3046 aa13.85□□□□□ -0.19
VAMP4-203ENST00000474047 OR5K3A6NET4 321 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 IQCF5A8MTL0 148 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms