RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 LMOD3Q0VAK6 560 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 CUL4BQ13620 913 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 RFTN1Q14699 578 aaPredicted RBP1.59□□□□□ -2.15
CCDC39-203ENST00000473854 TEAD2Q15562 447 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 TIGD6Q17RP2 521 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 EIF2S3LQ2VIR3 472 aaKnown RBP1.59□□□□□ -2.15
CCDC39-203ENST00000473854 ANKRD54Q6NXT1 300 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 DENND1BQ6P3S1 775 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 ANO5Q75V66 913 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 GPR180Q86V85 440 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 SMC5Q8IY18 1101 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 FTSJ3Q8IY81 847 aaKnown RBP1.59□□□□□ -2.15
CCDC39-203ENST00000473854 KIAA2013Q8IYS2 634 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 SPICE1Q8N0Z3 855 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 ADSSL1Q8N142 457 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 PARP8Q8N3A8 854 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 VPS37AQ8NEZ2 397 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 SLC38A5Q8WUX1 472 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 CNOT9Q92600 299 aaKnown RBP1.59□□□□□ -2.15
CCDC39-203ENST00000473854 WDR12Q9GZL7 423 aaKnown RBP1.59□□□□□ -2.15
CCDC39-203ENST00000473854 ZNF700Q9H0M5 742 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 LIMA1Q9UHB6 759 aaKnown RBP1.59□□□□□ -2.15
CCDC39-203ENST00000473854 TSPYL4Q9UJ04 414 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 DDX19BQ9UMR2 479 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 MYH9P35579 1960 aaKnown RBP1.59□□□□□ -2.16
CCDC39-203ENST00000473854 NPHP3Q7Z494 1330 aa1.59□□□□□ -2.16
CCDC39-203ENST00000473854 RBBP6Q7Z6E9 1792 aaKnown RBP1.59□□□□□ -2.16
CCDC39-203ENST00000473854 PARP14Q460N5 1801 aa1.59□□□□□ -2.16
CCDC39-203ENST00000473854 MYH11P35749 1972 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 SH2D7A6NKC9 451 aaPredicted RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 MAGEB17A8MXT2 336 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 BUD23O43709 281 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 HTATSF1O43719 755 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 AP2A2O94973 939 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 IGHV3-13P01766 116 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 CSTBP04080 98 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 SETSIPP0DME0 302 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 MSH3P20585 1137 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 AGAP20933 346 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 MCCP23508 829 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 HTR3AP46098 478 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 CLDN2P57739 230 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 CSNK2A1P68400 391 aaPredicted RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 POU5F1Q01860 360 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 CALD1Q05682 793 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 CHRNDQ07001 517 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 BRD3Q15059 726 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 SGSM1Q2NKQ1 1148 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 C15orf32Q32M92 178 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 ARHGEF16Q5VV41 709 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 TANGO2Q6ICL3 276 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 LRRC8EQ6NSJ5 796 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 ZNF530Q6P9A1 599 aaPredicted RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 C1orf228Q6PIY5 440 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 Q6ZSR9 355 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 PIWIL4Q7Z3Z4 852 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 KCNMB4Q86W47 210 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 POM121L12Q8N7R1 296 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 CSNK2A3Q8NEV1 391 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 POF1BQ8WVV4 589 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 DNAAF4Q8WXU2 420 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 MAGED4Q96JG8 741 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 TWNKQ96RR1 684 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 CRB3Q9BUF7 120 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 NUF2Q9BZD4 464 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 API5Q9BZZ5 524 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 LAT2Q9GZY6 243 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 LMAN2LQ9H0V9 348 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 PNNQ9H307 717 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 SAYSD1Q9NPB0 183 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 TCP11L1Q9NUJ3 509 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 SRP68Q9UHB9 627 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 FBXO9Q9UK97 447 aaPredicted RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 DERAQ9Y315 318 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 PTPRFP10586 1907 aa1.58□□□□□ -2.16
CCDC39-203ENST00000473854 IBTKQ9P2D0 1353 aaPredicted RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 ZNFX1Q9P2E3 1918 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 DICER1Q9UPY3 1922 aaKnown RBP1.58□□□□□ -2.16
CCDC39-203ENST00000473854 ZNF609O15014 1411 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 BCL9LQ86UU0 1499 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 DOCK5Q9H7D0 1870 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 DUOX1Q9NRD9 1551 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PABPN1LA6NDY0 278 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 ANKRD66B4E2M5 251 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 F5H423 210 aaPredicted RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 IPO5O00410 1097 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PER2O15055 1255 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 SPINT2O43291 252 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PEX14O75381 377 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 RAF1P04049 648 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 IGKV5-2P06315 115 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 CYC1P08574 325 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 NR2F2P24468 414 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 ANP32AP39687 249 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PIP4K2AP48426 406 aaPredicted RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 HUNKP57058 714 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 NUCB1Q02818 461 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 FOXO1Q12778 655 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 SLC39A6Q13433 755 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 MORC3Q14149 939 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms