RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 MAPK13O15264 365 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 RAD51BO15315 384 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 YY2O15391 372 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 KCNN4O15554 427 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 HUS1O60921 280 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 STC2O76061 302 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 INMTO95050 263 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 ENO2P09104 434 aaPredicted RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 DLDP09622 509 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 ZDHHC11BP0C7U3 371 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 HNRNPCL4P0DMR1 293 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 MED14OSP0DP75 135 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 LCP1P13796 627 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 FPR2P25090 351 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CTNNA2P26232 953 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 HOXD9P28356 352 aaPredicted RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CD70P32970 193 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 HSPA13P48723 471 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 COPB1P53618 953 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CLNS1AP54105 237 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 ITGA1P56199 1179 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 MAP3K7CLP57077 242 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 TAS2R38P59533 333 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 RPP38P78345 283 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 MAPK7Q13164 816 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CDSNQ15517 529 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 ADRM1Q16186 407 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 BMT2Q1RMZ1 405 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 ZNF630Q2M218 657 aaPredicted RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SOWAHAQ2M3V2 549 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 MYLK3Q32MK0 819 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 ZNF385BQ569K4 471 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CMPK2Q5EBM0 449 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 TCTE1Q5JU00 501 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SNX30Q5VWJ9 437 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 DENND5AQ6IQ26 1287 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 DUS1LQ6P1R4 473 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 NEK5Q6P3R8 708 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 C4orf50Q6ZRC1 276 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CENPQQ7L2Z9 268 aaPredicted RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 PARS2Q7L3T8 475 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 ABI3BPQ7Z7G0 1075 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 NEK8Q86SG6 692 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 NUP93Q8N1F7 819 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 Q8N1Y9 231 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CBARPQ8N350 705 aaPredicted RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 NKAPQ8N5F7 415 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CEP112Q8N8E3 955 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SLC4A11Q8NBS3 891 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 BBOF1Q8ND07 529 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 DENND6BQ8NEG7 585 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 OR6C4Q8NGE1 309 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 MZB1Q8WU39 189 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 GFM2Q969S9 779 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SIGLEC10Q96LC7 697 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 BMFQ96LC9 184 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SLC25A23Q9BV35 468 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 LRRC61Q9BV99 259 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 EDEM3Q9BZQ6 932 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 FAM129AQ9BZQ8 928 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SCPEP1Q9HB40 452 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 NMUR1Q9HB89 426 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 MCCC2Q9HCC0 563 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SDHAF3Q9NRP4 125 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 IARS2Q9NSE4 1012 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 ATAD3AQ9NVI7 634 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 INTS10Q9NVR2 710 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 TAS2R7Q9NYW3 318 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 NCKIPSDQ9NZQ3 722 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 HOOK1Q9UJC3 728 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 GGA2Q9UJY4 613 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SARDHQ9UL12 918 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SCML1Q9UN30 329 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 PCDHA12Q9UN75 941 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 KCNJ14Q9UNX9 436 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 TMEM5Q9Y2B1 443 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 R3HDM2Q9Y2K5 976 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 MED16Q9Y2X0 877 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 SNX9Q9Y5X1 595 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CSNK1G3Q9Y6M4 447 aa4.36□□□□□ -1.71
LMNB1-205ENST00000472034 NYNRINQ9P2P1 1898 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
LMNB1-205ENST00000472034 CNTRLQ7Z7A1 2325 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 VWA3AA6NCI4 1184 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 DBX1A6NMT0 343 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GOLGA8SH3BPF8 625 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GOLGA8RI6L899 631 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 UBXN8O00124 270 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 NDUFS8O00217 210 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TPP1O14773 563 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 POLR2DO15514 142 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PLRG1O43660 514 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 MGRN1O60291 552 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PIP5K1CO60331 668 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 RNASEH1O60930 286 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GUCY1B2O75343 617 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 OR5F1O95221 314 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TGDSO95455 350 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GUCA1CO95843 209 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SCGB1D2O95969 90 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms