RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 LAIR1Q6GTX8 287 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 TCEAL6Q6IPX3 200 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 UGT3A1Q6NUS8 523 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 PAQR3Q6TCH7 311 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 OTOAQ7RTW8 1153 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 CROCCP2Q86T23 111 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 TRABD2AQ86V40 505 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 AMZ2Q86W34 360 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 VRK3Q8IV63 474 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 C4orf33Q8N1A6 199 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 DEPDC4Q8N2C3 294 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 TMEM151AQ8N4L1 468 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 OXR1Q8N573 874 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 GOLGA6L1Q8N7Z2 621 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 CCL4L1Q8NHW4 92 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 ATOH1Q92858 354 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 HPS1Q92902 700 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 TCEAL3Q969E4 200 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 SKA1Q96BD8 255 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 ARL8AQ96BM9 186 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 MTBPQ96DY7 904 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 LINGO1Q96FE5 620 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 SCARF2Q96GP6 870 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 ZNF514Q96K75 400 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 TIMM29Q9BSF4 260 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 LRRC61Q9BV99 259 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 TMEM168Q9H0V1 697 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 ARRDC1-AS1Q9H2J1 176 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 COG4Q9H9E3 785 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 TMBIM4Q9HC24 238 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 KLC4Q9NSK0 619 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 SPATS2LQ9NUQ6 558 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 KLF15Q9UIH9 416 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 GPR34Q9UPC5 381 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 DOLKQ9UPQ8 538 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 RUVBL2Q9Y230 463 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 DGKBQ9Y6T7 804 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 CACNA1HO95180 2353 aa8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 ASCC3Q8N3C0 2202 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-213ENST00000469498 RP1P56715 2156 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 MDC1Q14676 2089 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 A0A096LPK6 155 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 MGAT4DA6NG13 374 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 PDZK1P1A8MUH7 402 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 OPA1O60313 960 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 SNX2O60749 519 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 RFPL1O75677 317 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 C2P06681 752 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 CTSEP14091 401 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 NME1P15531 152 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 VCLP18206 1134 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ATP5DP30049 168 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 HOXD12P35452 270 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ACTR1BP42025 376 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 CTSKP43235 329 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ACTR1AP61163 376 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 CTBSQ01459 385 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ILF2Q12905 390 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 C1orf61Q13536 156 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 CSHL1Q14406 222 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 TTLL9Q3SXZ7 439 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ZNF658BQ4V348 819 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 TTMPQ5BVD1 217 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ACSBG2Q5FVE4 666 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 PRRT3Q5FWE3 981 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 SLC30A9Q6PML9 568 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 TMEM207Q6UWW9 146 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 PIWIL4Q7Z3Z4 852 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 RABEPKQ7Z6M1 372 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 CFAP206Q8IYR0 622 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 SPATA6LQ8N4H0 392 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 OR2I1PQ8NGU4 316 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 OR2L2Q8NH16 312 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 LMX1AQ8TE12 382 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 KCTD4Q8WVF5 259 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 SKA2Q8WVK7 121 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ANKRD49Q8WVL7 239 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 INPP5DQ92835 1189 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ISL2Q96A47 359 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 TMEM159Q96B96 161 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 PGM2Q96G03 612 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 LOXL4Q96JB6 756 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 LINC00615Q96LM1 132 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 SH3GL2Q99962 352 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 SLC13A1Q9BZW2 595 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 WWP1Q9H0M0 922 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 POPDC3Q9HBV1 291 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 CAPN10Q9HC96 672 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 GULP1Q9UBP9 304 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 GMEB2Q9UKD1 530 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 PSMD13Q9UNM6 376 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 NOVA2Q9UNW9 492 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 DHRS7Q9Y394 339 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ST14Q9Y5Y6 855 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 ADAMTS20P59510 1910 aa8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 COL5A1P20908 1838 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-213ENST00000469498 A0A087X1B8 175 aa8.21□□□□□ -1.1
GAPVD1-213ENST00000469498 SLC5A10A0PJK1 596 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms