RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 MED24O75448 989 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 FAM106CPP0CH98 169 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 PTAFRP25105 342 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 GNL1P36915 607 aaPredicted RBP4.87□□□□□ -1.63
LSM5-209ENST00000468872 USP8P40818 1118 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 PLIN5Q00G26 463 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 TFCP2Q12800 502 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 KIF5AQ12840 1032 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 GTF2H2Q13888 395 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 KRT81Q14533 505 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 NR1D2Q14995 579 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 VWC2Q2TAL6 325 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 GCNT6Q5T4J0 391 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 GTF2H2CQ6P1K8 395 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 SUSD1Q6UWL2 747 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 CREB3L2Q70SY1 520 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 GALNTL5Q7Z4T8 443 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 THNSL1Q8IYQ7 743 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 GBGT1Q8N5D6 347 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 PAPD5Q8NDF8 572 aaKnown RBP4.87□□□□□ -1.63
LSM5-209ENST00000468872 EXD1Q8NHP7 514 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 KIF18AQ8NI77 898 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 BBS10Q8TAM1 723 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 LMO3Q8TAP4 145 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 TMEM255BQ8WV15 326 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 SMPDL3BQ92485 455 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 CDCA5Q96FF9 252 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 PIH1D3Q9NQM4 214 aaKnown RBP4.87□□□□□ -1.63
LSM5-209ENST00000468872 MRGBPQ9NV56 204 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 OSER1Q9NX31 292 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 MALT1Q9UDY8 824 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 ANAPC5Q9UJX4 755 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 VDAC3Q9Y277 283 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 DLGAP4Q9Y2H0 992 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 YIPF1Q9Y548 306 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 PCF11O94913 1555 aaKnown RBP4.87□□□□□ -1.63
LSM5-209ENST00000468872 TMEM221A6NGB7 291 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 HNRNPCL2B2RXH8 293 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 TRIM77I1YAP6 450 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 OR10H2O60403 315 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 TBCAO75347 108 aaKnown RBP4.86□□□□□ -1.63
LSM5-209ENST00000468872 RECQL5O94762 991 aaPredicted RBP4.86□□□□□ -1.63
LSM5-209ENST00000468872 BMP10O95393 424 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 DANCRP0C864 163 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 SCG2P13521 617 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 IFNAR1P17181 557 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 GM2AP17900 193 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 ERCC2P18074 760 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 AMPHP49418 695 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 PPARDQ03181 441 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
LSM5-209ENST00000468872 HSPB3Q12988 150 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 ZBTB17Q13105 803 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 SNTA1Q13424 505 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 TNIP1Q15025 636 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 HYAL4Q2M3T9 481 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 OR7E24Q6IFN5 339 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 FAM198BQ6UWH4 519 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 KMT5CQ86Y97 462 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 SEMA4DQ92854 862 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 SPDL1Q96EA4 605 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 SIPA1Q96FS4 1042 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 BICD1Q96G01 975 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 SLC25A23Q9BV35 468 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 FNDC11Q9BVV2 318 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 TM6SF1Q9BZW5 370 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 C6orf106Q9H6K1 298 aaPredicted RBP4.86□□□□□ -1.63
LSM5-209ENST00000468872 UBTD1Q9HAC8 227 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 LRRC4Q9HBW1 653 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 MIOSQ9NXC5 875 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 SLC24A2Q9UI40 661 aa4.86□□□□□ -1.63
LSM5-209ENST00000468872 ANKRD66B4E2M5 251 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 DVL1O14640 695 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 BUD23O43709 281 aaKnown RBP4.85□□□□□ -1.63
LSM5-209ENST00000468872 ZBTB11O95625 1053 aaPredicted RBP4.85□□□□□ -1.63
LSM5-209ENST00000468872 PPP1R3DO95685 299 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 CDH1P12830 882 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 ACHEP22303 614 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 PCGF2P35227 344 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 ARCN1P48444 511 aaKnown RBP4.85□□□□□ -1.63
LSM5-209ENST00000468872 GAS1P54826 345 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 PLA2G7Q13093 441 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 SCARB2Q14108 478 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 PTPRCAPQ14761 206 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 HECTD3Q5T447 861 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 C1QTNF12Q5T7M4 302 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 GRTP1Q5TC63 336 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 TRAT1Q6PIZ9 186 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 DCLRE1AQ6PJP8 1040 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 PLXDC2Q6UX71 529 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 NR2C2APQ86WQ0 139 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.85□□□□□ -1.63
LSM5-209ENST00000468872 CEP57L1Q8IYX8 460 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 CAMKVQ8NCB2 501 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 MOSPD2Q8NHP6 518 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 RTP4Q96DX8 246 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 OXNAD1Q96HP4 312 aaPredicted RBP4.85□□□□□ -1.63
LSM5-209ENST00000468872 SPATA17Q96L03 361 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 NEURL2Q9BR09 285 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 ADPGKQ9BRR6 497 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms