RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 COPS2P61201 443 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 GPS2Q13227 327 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 IL10RAQ13651 578 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 UGT8Q16880 541 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 CPZQ66K79 652 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 DARS2Q6PI48 645 aaKnown RBP20.51■□□□□ 0.87
COL9A3-207ENST00000467819 APLFQ8IW19 511 aaPredicted RBP20.51■□□□□ 0.87
COL9A3-207ENST00000467819 CCDC110Q8TBZ0 833 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 HM13Q8TCT9 377 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 SEC14L1Q92503 715 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 MIB2Q96AX9 1013 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 LINC00615Q96LM1 132 aaPredicted RBP20.51■□□□□ 0.87
COL9A3-207ENST00000467819 TLR10Q9BXR5 811 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 KCND1Q9NSA2 647 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 SEC16AO15027 2179 aa20.51■□□□□ 0.87
COL9A3-207ENST00000467819 USP9YO00507 2555 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-207ENST00000467819 STK10O94804 968 aaKnown RBP20.5■□□□□ 0.87
COL9A3-207ENST00000467819 PYGMP11217 842 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 ITGALP20701 1170 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 CDH3P22223 829 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 NDUFS1P28331 727 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 CYLC1P35663 651 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-207ENST00000467819 PRLHRP49683 370 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 ZNF140P52738 457 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-207ENST00000467819 CHAF1BQ13112 559 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 PRKAA1Q13131 559 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 SPARCL1Q14515 664 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 PRAMEF17Q5VTA0 474 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 CAPRIN2Q6IMN6 1127 aaKnown RBP20.5■□□□□ 0.87
COL9A3-207ENST00000467819 MICALCLQ6ZW33 695 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 SYVN1Q86TM6 617 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 CCDC170Q8IYT3 715 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 NXPE1Q8N323 547 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 OR8K5Q8NH50 307 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 ULK4Q96C45 1275 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 COPS8Q99627 209 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 TBL1YQ9BQ87 522 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 OSBPL8Q9BZF1 889 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 TRIM5Q9C035 493 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 LUC7LQ9NQ29 371 aaKnown RBP20.5■□□□□ 0.87
COL9A3-207ENST00000467819 FARSAQ9Y285 508 aaKnown RBP20.5■□□□□ 0.87
COL9A3-207ENST00000467819 PCDHA3Q9Y5H8 950 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 HEBP2Q9Y5Z4 205 aa20.5■□□□□ 0.87
COL9A3-207ENST00000467819 SPTAN1Q13813 2472 aaKnown RBP20.5■□□□□ 0.87
COL9A3-207ENST00000467819 CCDC66A2RUB6 948 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 GSAPA4D1B5 854 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 SLC9B1P1A6NJY1 282 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 AGAP14A8MT82 685 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 MSLNQ13421 630 aaPredicted RBP20.49■□□□□ 0.87
COL9A3-207ENST00000467819 LAMB3Q13751 1172 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 CARFQ8N187 725 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 SLC38A9Q8NBW4 561 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 ACVR1CQ8NER5 493 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 THAP4Q8WY91 577 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 SPATA13Q96N96 652 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 FERD3LQ96RJ6 166 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 CCM2Q9BSQ5 444 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 CHST8Q9H2A9 424 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 FANCEQ9HB96 536 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 POMT2Q9UKY4 750 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 BTRCQ9Y297 605 aa20.49■□□□□ 0.87
COL9A3-207ENST00000467819 CCDC88CQ9P219 2028 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 ARGFXA6NJG6 315 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 CFAP99D6REC4 459 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 ATP1B2P14415 290 aaPredicted RBP20.48■□□□□ 0.87
COL9A3-207ENST00000467819 HADHAP40939 763 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 NAP1L1P55209 391 aaKnown RBP20.48■□□□□ 0.87
COL9A3-207ENST00000467819 ABRQ12979 859 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 DENND5AQ6IQ26 1287 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 AADACL2Q6P093 401 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 SNX20Q7Z614 316 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 ATCAYQ86WG3 371 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 LCN9Q8WX39 176 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 NRTNQ99748 197 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 SRMSQ9H3Y6 488 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 COG4Q9H9E3 785 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 LATS2Q9NRM7 1088 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 EFR3BQ9Y2G0 817 aa20.48■□□□□ 0.87
COL9A3-207ENST00000467819 UTP20O75691 2785 aaKnown RBP20.48■□□□□ 0.87
COL9A3-207ENST00000467819 SPTBN1Q01082 2364 aaKnown RBP20.48■□□□□ 0.87
COL9A3-207ENST00000467819 FER1L5A0AVI2 2057 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 SNRNP200O75643 2136 aaKnown RBP20.47■□□□□ 0.87
COL9A3-207ENST00000467819 CLEC18AA5D8T8 446 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 RCCD1A6NED2 376 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 KLK3P07288 261 aaPredicted RBP20.47■□□□□ 0.87
COL9A3-207ENST00000467819 MC4RP32245 332 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 CDKN1CP49918 316 aaPredicted RBP20.47■□□□□ 0.87
COL9A3-207ENST00000467819 ZRANB3Q5FWF4 1079 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 LCN10Q6JVE6 187 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 SARM1Q6SZW1 724 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 CLEC18BQ6UXF7 455 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 CLEC18CQ8NCF0 446 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 HEXDCQ8WVB3 486 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 CPT1BQ92523 772 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 CLIP3Q96DZ5 547 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 DNAJC1Q96KC8 554 aaKnown RBP20.47■□□□□ 0.87
COL9A3-207ENST00000467819 SLC25A23Q9BV35 468 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 ACSS2Q9NR19 701 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 C1GALT1Q9NS00 363 aa20.47■□□□□ 0.87
COL9A3-207ENST00000467819 ZDHHC3Q9NYG2 299 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms