RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 GTF2H3Q13889 308 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 SSPNQ14714 243 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 PRKD1Q15139 912 aaPredicted RBP11.83□□□□□ -0.52
UBR4-211ENST00000467272 PCSK7Q16549 785 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 PTCHD3Q3KNS1 767 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 SIRPB2Q5JXA9 342 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 ALKBH5Q6P6C2 394 aaKnown RBP11.83□□□□□ -0.52
UBR4-211ENST00000467272 GALNT16Q8N428 558 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 BEND7Q8N7W2 519 aaPredicted RBP11.83□□□□□ -0.52
UBR4-211ENST00000467272 SGSM3Q96HU1 749 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 MRGPRX2Q96LB1 330 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 TRAPPC9Q96Q05 1148 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 NRTNQ99748 197 aa11.83□□□□□ -0.52
UBR4-211ENST00000467272 ZCCHC2Q9C0B9 1178 aaKnown RBP11.83□□□□□ -0.52
UBR4-211ENST00000467272 G3BP2Q9UN86 482 aaKnown RBP11.83□□□□□ -0.52
UBR4-211ENST00000467272 GLYATL1P3A0A0U1RQE8 302 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 TMEM150CB9EJG8 249 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 DDX3YO15523 660 aaKnown RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 ZNF749O43361 778 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 HCRTR1O43613 425 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 SERPING1P05155 500 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 POLR2CP19387 275 aaPredicted RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 HLA-DPA1P20036 260 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 ARCN1P48444 511 aaKnown RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 WNT3AP56704 352 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 AP1B1Q10567 949 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 MSLNQ13421 630 aaPredicted RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 PDK1Q15118 436 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 ZRSR2Q15696 482 aaKnown RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 TAZQ16635 292 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 FNBP1LQ5T0N5 605 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 MRPL14Q6P1L8 145 aaKnown RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 SASS6Q6UVJ0 657 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 NPNTQ6UXI9 565 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 FAM151BQ6UXP7 276 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 CDHR3Q6ZTQ4 885 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 PPP1R32Q7Z5V6 425 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 KCNMB4Q86W47 210 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 RAB43Q86YS6 212 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 SRRM1Q8IYB3 904 aaKnown RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 LILRA3Q8N6C8 439 aaPredicted RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 OR4E2Q8NGC2 313 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 GDAP1Q8TB36 358 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 CLIP3Q96DZ5 547 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 OXNAD1Q96HP4 312 aaPredicted RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 C12orf66Q96MD2 445 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 TTC25Q96NG3 672 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 GBP5Q96PP8 586 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 TFB2MQ9H5Q4 396 aaKnown RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 UVRAGQ9P2Y5 699 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 HEY1Q9Y5J3 304 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 COPG1Q9Y678 874 aaKnown RBP11.82□□□□□ -0.52
UBR4-211ENST00000467272 FER1L5A0AVI2 2057 aa11.82□□□□□ -0.52
UBR4-211ENST00000467272 A0A0A6YYK5 440 aaPredicted RBP11.81□□□□□ -0.52
UBR4-211ENST00000467272 BTN3A1O00481 513 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 HNRNPRO43390 633 aaKnown RBP11.81□□□□□ -0.52
UBR4-211ENST00000467272 PMPCBO75439 489 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 ONECUT2O95948 504 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 UMODP07911 640 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 CBSLP0DN79 551 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 PYGMP11217 842 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 CBSP35520 551 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 GJC1P36383 396 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 SSR1P43307 286 aaKnown RBP11.81□□□□□ -0.52
UBR4-211ENST00000467272 CHRNA4P43681 627 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 PREPP48147 710 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 RIPPLY3P57055 190 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 XRCC4Q13426 336 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 ITGA9Q13797 1035 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 SLC1A5Q15758 541 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 RHBDD2Q6NTF9 364 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 ADGRF3Q8IZF5 1079 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 ACVR1CQ8NER5 493 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 OR2Y1Q8NGV0 311 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 FLVCR1-AS1Q8TAF5 88 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 NAT14Q8WUY8 206 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 MARVELD3Q96A59 401 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 FER1L6-AS2Q96M78 137 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 ZNF830Q96NB3 372 aaPredicted RBP11.81□□□□□ -0.52
UBR4-211ENST00000467272 OR52A5Q9H2C5 316 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 FANCEQ9HB96 536 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 SLC22A11Q9NSA0 550 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 SOHLH2Q9NX45 425 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 P4HTMQ9NXG6 502 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 UBP1Q9NZI7 540 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 HACD3Q9P035 362 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 FAM153AQ9UHL3 310 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 LCMT1Q9UIC8 334 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 CSAG2Q9Y5P2 127 aa11.81□□□□□ -0.52
UBR4-211ENST00000467272 MASP2O00187 686 aa11.8□□□□□ -0.52
UBR4-211ENST00000467272 IGHEP01854 428 aa11.8□□□□□ -0.52
UBR4-211ENST00000467272 ALPPP05187 535 aa11.8□□□□□ -0.52
UBR4-211ENST00000467272 HBQ1P09105 142 aa11.8□□□□□ -0.52
UBR4-211ENST00000467272 CYP2A7P20853 494 aa11.8□□□□□ -0.52
UBR4-211ENST00000467272 CDH3P22223 829 aa11.8□□□□□ -0.52
UBR4-211ENST00000467272 NDUFS1P28331 727 aa11.8□□□□□ -0.52
UBR4-211ENST00000467272 GRNP28799 593 aaKnown RBP11.8□□□□□ -0.52
UBR4-211ENST00000467272 TSFMP43897 325 aaKnown RBP11.8□□□□□ -0.52
UBR4-211ENST00000467272 LMAN1P49257 510 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms