RNA–Protein interactions for RNA: ENST00000466353.1

PLXNB1-209, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 626 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-209ENST00000466353 NLGN4XQ8N0W4 816 aa18.22■□□□□ 0.51
PLXNB1-209ENST00000466353 NLGN4YQ8NFZ3 816 aaPredicted RBP18.22■□□□□ 0.51
PLXNB1-209ENST00000466353 OR4E2Q8NGC2 313 aa18.22■□□□□ 0.51
PLXNB1-209ENST00000466353 CHRAC1Q9NRG0 131 aa18.22■□□□□ 0.51
PLXNB1-209ENST00000466353 LOC101059948A0A1B0GTJ6 334 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 OR1I1O60431 355 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 DLGAP3O95886 979 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 MAP4P27816 1152 aaKnown RBP18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 SESN2P58004 480 aaPredicted RBP18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 CRADDP78560 199 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 BASP1P80723 227 aaKnown RBP18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 LAMB3Q13751 1172 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 KCNAB1Q14722 419 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 FBXO38Q6PIJ6 1188 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 REXO1L1PQ8IX06 675 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 ZSCAN1Q8NBB4 408 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 OR6P1Q8NGX9 317 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 OR4L1Q8NH43 312 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 UBXN4Q92575 508 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 MS4A14Q96JA4 679 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 SLC41A2Q96JW4 573 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 PPM1MQ96MI6 270 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 SLC12A9Q9BXP2 914 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 VPS37BQ9H9H4 285 aa18.21■□□□□ 0.51
PLXNB1-209ENST00000466353 TCRBV7S3A2A0A539 114 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 FOLR1P15328 257 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 POLR2CP19387 275 aaPredicted RBP18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 NDUFS1P28331 727 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 CD151P48509 253 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 RPA4Q13156 261 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 IL11RAQ14626 422 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 BRD3Q15059 726 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 TRIP13Q15645 432 aaPredicted RBP18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 PCID2Q5JVF3 399 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 DNTTIP2Q5QJE6 756 aaKnown RBP18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 AFTPHQ6ULP2 937 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 C4orf22Q6V702 233 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 PACS1Q6VY07 963 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 OOSP2Q86WS3 158 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 ZNF843Q8N446 348 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 ACVR1CQ8NER5 493 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 PPHLN1Q8NEY8 458 aaKnown RBP18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 EXTL1Q92935 676 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 EIF2B3Q9NR50 452 aaKnown RBP18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 HEBP2Q9Y5Z4 205 aa18.2■□□□□ 0.5
PLXNB1-209ENST00000466353 UBA6A0AVT1 1052 aaPredicted RBP18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 IFRD1O00458 451 aaPredicted RBP18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 SPAG6O75602 509 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 FGF5P12034 268 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 KPNA2P52292 529 aaKnown RBP18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 TERF1P54274 439 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 PRKG2Q13237 762 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 LYPLAL1Q5VWZ2 237 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 ARMC6Q6NXE6 501 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 TTC27Q6P3X3 843 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 NLRP9Q7RTR0 991 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 LDB1Q86U70 411 aaPredicted RBP18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 RASGRP3Q8IV61 690 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 RASGEF1CQ8N431 466 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 EXD3Q8N9H8 876 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 SIDT2Q8NBJ9 832 aaKnown RBP18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 ELMO1Q92556 727 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 TFGQ92734 400 aaPredicted RBP18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 CD180Q99467 661 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 ULBP3Q9BZM4 244 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 HOMER3Q9NSC5 361 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 MARCH4Q9P2E8 410 aaPredicted RBP18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 TTC7AQ9ULT0 858 aaPredicted RBP18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 JRKLQ9Y4A0 524 aa18.19■□□□□ 0.5
PLXNB1-209ENST00000466353 SLC5A10A0PJK1 596 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 TLCD2A6NGC4 264 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 BHMG1C9JSJ3 638 aaPredicted RBP18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 BTN3A3O00478 584 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 LIN7AO14910 233 aaPredicted RBP18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 KIAA0754O94854 1291 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 TIAF1O95411 115 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 GSTM1P09488 218 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 EBLN1P0CF75 366 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 NMBRP28336 390 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 NPY2RP49146 381 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 PRAMEP78395 509 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 GSTM4Q03013 218 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 ABHD18Q0P651 414 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 C19orf57Q0VDD7 668 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 BOP1Q14137 746 aaKnown RBP18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 TBR1Q16650 682 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 FASTKD1Q53R41 847 aaKnown RBP18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 ZNF449Q6P9G9 518 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 OR52E1Q8NGJ3 308 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 LCN9Q8WX39 176 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 PEX13Q92968 403 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.18■□□□□ 0.55e-7■■□□□ 12.7
PLXNB1-209ENST00000466353 SGSM3Q96HU1 749 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 AP1M1Q9BXS5 423 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 SRMSQ9H3Y6 488 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 TFB2MQ9H5Q4 396 aaKnown RBP18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 XKR8Q9H6D3 395 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 MVB12BQ9H7P6 319 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 TREX1Q9NSU2 369 aa18.18■□□□□ 0.5
PLXNB1-209ENST00000466353 IL17BQ9UHF5 180 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms