RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 GATA6Q92908 595 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 SH3KBP1Q96B97 665 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 CERS2Q96G23 380 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 CNTNAP3BQ96NU0 1288 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 CNTNAP3Q9BZ76 1288 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 VPS37BQ9H9H4 285 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 EPB41L5Q9HCM4 733 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 SAYSD1Q9NPB0 183 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 PPANQ9NQ55 473 aaKnown RBP11.39□□□□□ -0.59
CUX1-207ENST00000465461 POT1Q9NUX5 634 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 KLHL3Q9UH77 587 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 DMGDHQ9UI17 866 aaKnown RBP11.39□□□□□ -0.59
CUX1-207ENST00000465461 GNPTGQ9UJJ9 305 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 FBXO5Q9UKT4 447 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 IGHV5-10-1A0A0J9YXX1 117 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 E7ESA3 106 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 QSOX1O00391 747 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 TCEA3O75764 348 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 UBXN7O94888 489 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 CPNE6O95741 557 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 AMD1P17707 334 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 CHRM3P20309 590 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 RPS3P23396 243 aaKnown RBP eCLIP11.38□□□□□ -0.59
CUX1-207ENST00000465461 GABRB3P28472 473 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 SSTR1P30872 391 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 PGGT1BP53609 377 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 INHBCP55103 352 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 GFERP55789 205 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 PPP1CAP62136 330 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 CYP4F3Q08477 520 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 ABRQ12979 859 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 TUBB2AQ13885 445 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 KRT33BQ14525 404 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 C3orf38Q5JPI3 329 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 ARMC3Q5W041 872 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 ZNF549Q6P9A3 640 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 PIM3Q86V86 326 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 CCDC25Q86WR0 208 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 SLITRK4Q8IW52 837 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 MNS1Q8NEH6 495 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 OR10G6Q8NH81 332 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 CFAP61Q8NHU2 1237 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 RSC1A1Q92681 617 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 TFGQ92734 400 aaPredicted RBP11.38□□□□□ -0.59
CUX1-207ENST00000465461 CCDC74BQ96LY2 380 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 NDNQ99608 321 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 SLC30A3Q99726 388 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 TUBB2BQ9BVA1 445 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.38□□□□□ -0.59
CUX1-207ENST00000465461 XKR8Q9H6D3 395 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 CIDEBQ9UHD4 219 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 SATB2Q9UPW6 733 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 RUVBL2Q9Y230 463 aaKnown RBP11.38□□□□□ -0.59
CUX1-207ENST00000465461 CDYLQ9Y232 598 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 AK5Q9Y6K8 562 aa11.38□□□□□ -0.59
CUX1-207ENST00000465461 KLHL33A6NCF5 533 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 LILRA5A6NI73 299 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 IFRD1O00458 451 aaPredicted RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 LIN7AO14910 233 aaPredicted RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 DUX1O43812 170 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 TTC4O95801 387 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 PROS1P07225 676 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 PKMP14618 531 aaKnown RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 AOAHP28039 575 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 ACADLP28330 430 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 LEPRP48357 1165 aaKnown RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 ZFP36L1Q07352 338 aaKnown RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 RPA4Q13156 261 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 C16orf72Q14CZ0 275 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 PLCL1Q15111 1095 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 KIF26BQ2KJY2 2108 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 TEDDM1Q5T9Z0 273 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 RNF187Q5TA31 235 aaPredicted RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 STEAP4Q687X5 459 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 UNQ6494/PRO21346Q6UXR6 183 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 PDZD3Q86UT5 571 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 LRRC6Q86X45 466 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 CACTIN-AS1Q8N1I8 211 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 CEP112Q8N8E3 955 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 LMNTD1Q8N9Z9 388 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 SIDT2Q8NBJ9 832 aaKnown RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 C2CD4AQ8NCU7 369 aaPredicted RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 OR4E2Q8NGC2 313 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 OR5AR1Q8NGP9 310 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 WDR48Q8TAF3 677 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 PYROXD1Q8WU10 500 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 IFT81Q8WYA0 676 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 TMEM159Q96B96 161 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 LRRC39Q96DD0 335 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 C9orf72Q96LT7 481 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 TCF12Q99081 682 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 FAM167BQ9BTA0 163 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 NAT9Q9BTE0 207 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 HGH1Q9BTY7 390 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 TSSK1BQ9BXA7 367 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 SMYD2Q9NRG4 433 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 INTS10Q9NVR2 710 aaKnown RBP11.37□□□□□ -0.59
CUX1-207ENST00000465461 SLC24A2Q9UI40 661 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 PLAGL1Q9UM63 463 aa11.37□□□□□ -0.59
CUX1-207ENST00000465461 TDRKHQ9Y2W6 561 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms