RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SPRED1Q7Z699 444 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 RAB44Q7Z6P3 723 aaPredicted RBP16.57■□□□□ 0.24
USP39-211ENST00000465282 PDZD3Q86UT5 571 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 SLC22A15Q8IZD6 547 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 LRRN4CLQ8ND94 238 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 C12orf66Q96MD2 445 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 SLC38A3Q99624 504 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 DPYSL5Q9BPU6 564 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 FAM8A1Q9UBU6 413 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 NFU1Q9UMS0 254 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 PSMD13Q9UNM6 376 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 SPEGQ15772 3267 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 LILRA5A6NI73 299 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 OR52A4PA6NMU1 304 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 IQCF5A8MTL0 148 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 TNFRSF8P28908 595 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 ATP5DP30049 168 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 GPX6P59796 221 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 HSPA14Q0VDF9 509 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 NAB1Q13506 487 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 CNSTQ6PJW8 725 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 DHRS13Q6UX07 377 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 TMEM26Q6ZUK4 368 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 KRT222Q8N1A0 295 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 LILRA3Q8N6C8 439 aaPredicted RBP16.56■□□□□ 0.24
USP39-211ENST00000465282 GRAMD1AQ96CP6 724 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 RMDN2Q96LZ7 410 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 INSM2Q96T92 566 aaPredicted RBP16.56■□□□□ 0.24
USP39-211ENST00000465282 AARSD1Q9BTE6 412 aaKnown RBP16.56■□□□□ 0.24
USP39-211ENST00000465282 LRRN3Q9H3W5 708 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 MVB12BQ9H7P6 319 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 TXNDC16Q9P2K2 825 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 CDYLQ9Y232 598 aa16.56■□□□□ 0.24
USP39-211ENST00000465282 KNTC1P50748 2209 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 FAM159BA6NKW6 160 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 EIF3FO00303 357 aaPredicted RBP16.55■□□□□ 0.24
USP39-211ENST00000465282 NTN3O00634 580 aaPredicted RBP16.55■□□□□ 0.24
USP39-211ENST00000465282 NIPSNAP2O75323 286 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 VPS26AO75436 327 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 RPN2P04844 631 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 ACADLP28330 430 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 GABRB3P28472 473 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 PDHA2P29803 388 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 PREPP48147 710 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 INSM1Q01101 510 aaPredicted RBP16.55■□□□□ 0.24
USP39-211ENST00000465282 KRT33BQ14525 404 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 CCDC157Q569K6 752 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 ZNF549Q6P9A3 640 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 OR10G6Q8NH81 332 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 LKAAEAR1Q8TD35 194 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 TFGQ92734 400 aaPredicted RBP16.55■□□□□ 0.24
USP39-211ENST00000465282 CPNE1Q99829 537 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 FUT8Q9BYC5 575 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 IMP3Q9NV31 184 aaKnown RBP16.55■□□□□ 0.24
USP39-211ENST00000465282 KCNK4Q9NYG8 393 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 TAS2R13Q9NYV9 303 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 RABGEF1Q9UJ41 708 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 DHRS7Q9Y394 339 aa16.55■□□□□ 0.24
USP39-211ENST00000465282 SPTBN2O15020 2390 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 IGHV1OR21-1A0A087WYE8 117 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 B4GAT1O43505 415 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 KDM1AO60341 852 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 ADRB1P08588 477 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 CBSLP0DN79 551 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 ITGB6P18564 788 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 ALDH4A1P30038 563 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 CBSP35520 551 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 MAPK9P45984 424 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 CLCN7P51798 805 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 CSE1LP55060 971 aaKnown RBP16.54■□□□□ 0.24
USP39-211ENST00000465282 SPIDRQ14159 915 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 GBX1Q14549 363 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 BRD3Q15059 726 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 KYNUQ16719 465 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 CDCP2Q5VXM1 449 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 LRRC8EQ6NSJ5 796 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 FAM45BPQ6NSW5 357 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 UNC5DQ6UXZ4 953 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 CAPN12Q6ZSI9 719 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 NEK10Q6ZWH5 1172 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 TMPRSS7Q7RTY8 843 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 STRA8Q7Z7C7 330 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 TBC1D21Q8IYX1 336 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 ZBTB2Q8N680 514 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
USP39-211ENST00000465282 FAM45AQ8TCE6 357 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 INPP5DQ92835 1189 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 GFM1Q96RP9 751 aaKnown RBP16.54■□□□□ 0.24
USP39-211ENST00000465282 KIR3DX1Q9H7L2 352 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 POLG2Q9UHN1 485 aa16.54■□□□□ 0.24
USP39-211ENST00000465282 TMX2-CTNND1H3BSU7 103 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 DUX1O43812 170 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 CPNE6O95741 557 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 C1QAP02745 245 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 RPLP0P05388 317 aaKnown RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 ENO3P13929 434 aaPredicted RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 CD1CP29017 333 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 OR1D5P58170 312 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 CCL7P80098 99 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms