RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CYP4F12Q9HCS2 524 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 SAR1AQ9NR31 198 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 TM7SF3Q9NS93 570 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 TXLNGQ9NUQ3 528 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 KLF15Q9UIH9 416 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 TLK1Q9UKI8 766 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 SLC39A10Q9ULF5 831 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 H2AFYO75367 372 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 POP7O75817 140 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 TRIM16O95361 564 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 CPA3P15088 417 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 ITGB6P18564 788 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 CHRM3P20309 590 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 SAT1P21673 171 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 HOXD12P35452 270 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 PGGT1BP53609 377 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 C21orf59P57076 290 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 TAS2R39P59534 338 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 POU4F1Q01851 419 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 USP10Q14694 798 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 FAM45BPQ6NSW5 357 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 RD3Q7Z3Z2 195 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 LRRTM4Q86VH4 590 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 PARGQ86W56 976 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 SPNS2Q8IVW8 549 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 PPP1R14CQ8TAE6 165 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 FAM45AQ8TCE6 357 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 SREK1Q8WXA9 508 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 KCNJ9Q92806 393 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 ERP27Q96DN0 273 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 THOC1Q96FV9 657 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 LINC00615Q96LM1 132 aaPredicted RBP16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 CAB39LQ9H9S4 337 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 CARS2Q9HA77 564 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 GULP1Q9UBP9 304 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 SLC23A2Q9UGH3 650 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 DCTN4Q9UJW0 460 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 DGKBQ9Y6T7 804 aa16.61■□□□□ 0.25
EXOSC3-203ENST00000465229 SCAMP1O15126 338 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 KMOO15229 486 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 UNC5CO95185 931 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 CD9P21926 228 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 FDXRP22570 491 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 DPP6P42658 865 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 GNPDA1P46926 289 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 PRKAA2P54646 552 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 RAB10P61026 200 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 BNC1Q01954 994 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 ZNF542PQ5EBM4 170 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 CES4AQ5XG92 561 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 FAM91A1Q658Y4 838 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 GALNT13Q8IUC8 556 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 HID1Q8IV36 788 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 CEP97Q8IW35 865 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 PLD6Q8N2A8 252 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 TSNARE1Q96NA8 513 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 SLC30A3Q99726 388 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 CCM2Q9BSQ5 444 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 TUBB6Q9BUF5 446 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 TMEM120AQ9BXJ8 343 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 NMRAL1Q9HBL8 299 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 TAS2R13Q9NYV9 303 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 RAB23Q9ULC3 237 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 DNMT3AQ9Y6K1 912 aaPredicted RBP16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 CABIN1Q9Y6J0 2220 aa16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 TNRC6BQ9UPQ9 1833 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-203ENST00000465229 A0A0G2JND7 137 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 E5RI56 91 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 F8W8V4 182 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 HNRNPCL1O60812 293 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 RASSF9O75901 435 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 EPN2O95208 641 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 FTH1P02794 183 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 CCR7P32248 378 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 CTSKP43235 329 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 CLCN7P51798 805 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 HK3P52790 923 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 DUOXA1Q1HG43 343 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 KIF19Q2TAC6 998 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 ZNF658BQ4V348 819 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 PRAMEF14Q5SWL7 426 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 PIM3Q86V86 326 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 C10orf107Q8IVU9 208 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 CEP76Q8TAP6 659 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 PANX3Q96QZ0 392 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 GPR21Q99679 349 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 TCEAL2Q9H3H9 227 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 STN1Q9H668 368 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 SARS2Q9NP81 518 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 LATS2Q9NRM7 1088 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 SPATS2LQ9NUQ6 558 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 PLEKHM1Q9Y4G2 1056 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 GPSM3Q9Y4H4 160 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 A0A087X1B8 175 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 VPS26AO75436 327 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 RASGRP1O95267 797 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 TNFP01375 233 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 SLC35E2BP0CK96 405 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 STMN1P16949 149 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 IRX4P78413 519 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms