RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 FAM136AQ96C01 138 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 PANX3Q96QZ0 392 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 SLC30A3Q99726 388 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 MCMBPQ9BTE3 642 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 AARSD1Q9BTE6 412 aaKnown RBP18.51■□□□□ 0.55
LMNB1-204ENST00000463908 FAM159BA6NKW6 160 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 H3BMM5 538 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 SLCO2B1O94956 709 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 TOP3BO95985 862 aaKnown RBP18.5■□□□□ 0.55
LMNB1-204ENST00000463908 VIPP01282 170 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 ADRB1P08588 477 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 FAM153BP0C7A2 387 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 SLC35G4P0C7Q5 338 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 MYBL2P10244 700 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 MTHFD1P11586 935 aaKnown RBP18.5■□□□□ 0.55
LMNB1-204ENST00000463908 CD151P48509 253 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 CLCN7P51798 805 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 FAM153CQ494X1 144 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 RBM20Q5T481 1227 aaKnown RBP18.5■□□□□ 0.55
LMNB1-204ENST00000463908 DUS1LQ6P1R4 473 aaKnown RBP18.5■□□□□ 0.55
LMNB1-204ENST00000463908 ZNF449Q6P9G9 518 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 SPRED1Q7Z699 444 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 CHCHD4Q8N4Q1 142 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 GABPB2Q8TAK5 448 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-204ENST00000463908 FBF1Q8TES7 1133 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 ASZ1Q8WWH4 475 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 C12orf66Q96MD2 445 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 NDNQ99608 321 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 TSSK1BQ9BXA7 367 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 TSPYL1Q9H0U9 437 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 ZFATQ9P243 1243 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 WASF3Q9UPY6 502 aa18.5■□□□□ 0.55
LMNB1-204ENST00000463908 ASXL3Q9C0F0 2248 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 NTN3O00634 580 aaPredicted RBP18.49■□□□□ 0.55
LMNB1-204ENST00000463908 CDK4P11802 303 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 CD1CP29017 333 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 ALDH4A1P30038 563 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 GPR3P46089 330 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 PLOD1Q02809 727 aaPredicted RBP18.49■□□□□ 0.55
LMNB1-204ENST00000463908 GBX1Q14549 363 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 CDCP2Q5VXM1 449 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 TMEM26Q6ZUK4 368 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 OTOAQ7RTW8 1153 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 STRA8Q7Z7C7 330 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 SLC26A11Q86WA9 606 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 SLC22A15Q8IZD6 547 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 PHC3Q8NDX5 983 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 ACVR1CQ8NER5 493 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 GIMAP7Q8NHV1 300 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 TMEM159Q96B96 161 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 CXorf40BQ96DE9 158 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 SLC38A3Q99624 504 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 TBC1D10AQ9BXI6 508 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 CDC42EP4Q9H3Q1 356 aaKnown RBP18.49■□□□□ 0.55
LMNB1-204ENST00000463908 LRRN3Q9H3W5 708 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 POT1Q9NUX5 634 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 IMP3Q9NV31 184 aaKnown RBP18.49■□□□□ 0.55
LMNB1-204ENST00000463908 COMMD10Q9Y6G5 202 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 PIKFYVEQ9Y2I7 2098 aa18.49■□□□□ 0.55
LMNB1-204ENST00000463908 GOLGA4Q13439 2230 aaKnown RBP18.48■□□□□ 0.55
LMNB1-204ENST00000463908 IGHV1OR21-1A0A087WYE8 117 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 KPNA5O15131 536 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 RPLP0P05388 317 aaKnown RBP18.48■□□□□ 0.55
LMNB1-204ENST00000463908 APOA4P06727 396 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 CDKN2DP55273 166 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 CFHR1Q03591 330 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 BIRC2Q13490 618 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 GPR18Q14330 331 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 ST3GAL2Q16842 350 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 KBTBD12Q3ZCT8 623 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 PLEKHS1Q5SXH7 462 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 NKAIN2Q5VXU1 208 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 CCNI2Q6ZMN8 369 aaPredicted RBP18.48■□□□□ 0.55
LMNB1-204ENST00000463908 CEP128Q6ZU80 1094 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 PDZD3Q86UT5 571 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 ZC3HC1Q86WB0 502 aaKnown RBP18.48■□□□□ 0.55
LMNB1-204ENST00000463908 GSPT2Q8IYD1 628 aaKnown RBP18.48■□□□□ 0.55
LMNB1-204ENST00000463908 EIF1ADQ8N9N8 165 aaKnown RBP18.48■□□□□ 0.55
LMNB1-204ENST00000463908 SIDT2Q8NBJ9 832 aaKnown RBP18.48■□□□□ 0.55
LMNB1-204ENST00000463908 TFGQ92734 400 aaPredicted RBP18.48■□□□□ 0.55
LMNB1-204ENST00000463908 KCNJ9Q92806 393 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 SH3KBP1Q96B97 665 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 TXLNGYQ9BZA5 131 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 ABCG4Q9H172 646 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 UCK1Q9HA47 277 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 DHRS7Q9Y394 339 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 SPEGQ15772 3267 aa18.48■□□□□ 0.55
LMNB1-204ENST00000463908 SPAG6O75602 509 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 PGGT1BP53609 377 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 TUBB4BP68371 445 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 ABRQ12979 859 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 SQSTM1Q13501 440 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 SYTL3Q4VX76 610 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 ACSBG2Q5FVE4 666 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 USP53Q70EK8 1073 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 TMPRSS9Q7Z410 1059 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 MARCH9Q86YJ5 346 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 TRIM48Q8IWZ4 208 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 ZBTB2Q8N680 514 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 AVL9Q8NBF6 648 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms