RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 GOLGA4Q13439 2230 aaKnown RBP11.54□□□□□ -0.56
CPNE1-221ENST00000462352 A0A087WUV0 522 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 SPAARA0A1B0GVQ0 90 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 IFRD1O00458 451 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 PPM1DO15297 605 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 RIPK2O43353 540 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 NUDT21O43809 227 aaKnown RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 VPS26AO75436 327 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 FAM155BO75949 473 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 ABHD2P08910 425 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 GLB1P16278 677 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 XRCC1P18887 633 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 GP5P40197 560 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 FASLGP48023 281 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 ACADVLP49748 655 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 CDKN2DP55273 166 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 UBE2IP63279 158 aaKnown RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 TIAL1Q01085 375 aaKnown RBP eCLIP11.53□□□□□ -0.564e-11■■■■■ 37.8
CPNE1-221ENST00000462352 HHEXQ03014 270 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 BIRC2Q13490 618 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 PUM1Q14671 1186 aaKnown RBP eCLIP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 RPE65Q16518 533 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 PERM1Q5SV97 790 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 HECTD2Q5U5R9 776 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 FAM45BPQ6NSW5 357 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 EFL1Q7Z2Z2 1120 aaKnown RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 PDZD3Q86UT5 571 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 VRK3Q8IV63 474 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 TRIM48Q8IWZ4 208 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 SLC22A15Q8IZD6 547 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 ZBTB2Q8N680 514 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 SIDT2Q8NBJ9 832 aaKnown RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 ACVR1CQ8NER5 493 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 GIMAP7Q8NHV1 300 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 IFI44Q8TCB0 444 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 FAM45AQ8TCE6 357 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 CD200R1Q8TD46 325 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 NAT6Q93015 286 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 CXorf40BQ96DE9 158 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 MRRFQ96E11 262 aaKnown RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 VPS39Q96JC1 886 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 ELMO2Q96JJ3 720 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 GPR21Q99679 349 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 RBBP8Q99708 897 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 EPB41L4BQ9H329 900 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 STN1Q9H668 368 aaKnown RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 POT1Q9NUX5 634 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 IMP3Q9NV31 184 aaKnown RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 TOR4AQ9NXH8 423 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 LRIT1Q9P2V4 623 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 CPNE7Q9UBL6 633 aa11.53□□□□□ -0.56
CPNE1-221ENST00000462352 CFAP20Q9Y6A4 193 aaKnown RBP11.53□□□□□ -0.56
CPNE1-221ENST00000462352 PRAMEF33A0A0G2JMD5 474 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 FAM95CA0A1B0GW59 222 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 PCNX2A6NKB5 2137 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 RHPN2P1A8MT19 583 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 RFPL3O75679 317 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 SLCO2B1O94956 709 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 VIPP01282 170 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 MTHFD1P11586 935 aaKnown RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 CD9P21926 228 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 FDXRP22570 491 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 ACADLP28330 430 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 SPRP35270 261 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 LIMK2P53671 638 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 SIM1P81133 766 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 ILF2Q12905 390 aaKnown RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 SLC29A2Q14542 456 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 GBX1Q14549 363 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 KLHL38Q2WGJ6 581 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 TTLL9Q3SXZ7 439 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 ACSBG2Q5FVE4 666 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 GRTP1Q5TC63 336 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 UGT3A1Q6NUS8 523 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 DUS1LQ6P1R4 473 aaKnown RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 PIM3Q86V86 326 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 SPNS2Q8IVW8 549 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 AVL9Q8NBF6 648 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 AENQ8WTP8 325 aaKnown RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 TFGQ92734 400 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 INPP5DQ92835 1189 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 CCDC74AQ96AQ1 378 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 OLFM1Q99784 485 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 TAS2R13Q9NYV9 303 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 KLHL42Q9P2K6 505 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 TRMT6Q9UJA5 497 aaKnown RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 RAB21Q9UL25 225 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 MTO1Q9Y2Z2 717 aaKnown RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 VWA7Q9Y334 891 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 DHRS7Q9Y394 339 aa11.52□□□□□ -0.57
CPNE1-221ENST00000462352 CNOT1A5YKK6 2376 aaKnown RBP11.52□□□□□ -0.57
CPNE1-221ENST00000462352 SPTBN4Q9H254 2564 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 GP1BAP07359 652 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 TUBBP07437 444 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 FTH1P19P0C7X4 201 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 PNLIPP16233 465 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 SAT1P21673 171 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 ATP5DP30049 168 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 SKIV2L2P42285 1042 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms