RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PBLDP30039 288 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 MAGEA3P43357 314 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 PRLHRP49683 370 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ATP1A2P50993 1020 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ITGA8P53708 1063 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 EPHA4P54764 986 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ARL4CP56559 192 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 C16orf72Q14CZ0 275 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ANKRD20A4Q4UJ75 823 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 KIAA0930Q6ICG6 404 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 HIBCHQ6NVY1 386 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 WDR74Q6RFH5 385 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TMEM135Q86UB9 458 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TRIM48Q8IWZ4 208 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 RCBTB1Q8NDN9 531 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 HM13Q8TCT9 377 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 STAMBPL1Q96FJ0 436 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 SIGLEC10Q96LC7 697 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TCF12Q99081 682 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TSSK1BQ9BXA7 367 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 SNX24Q9Y343 169 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 RPS6KL1Q9Y6S9 549 aa12.97□□□□□ -0.33
RAB11FIP3-207ENST00000461009 RAD51CO43502 376 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 SEC31AO94979 1220 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 VIPP01282 170 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 FTH1P02794 183 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 THRAP10827 490 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 RPL10P27635 214 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 MAPK9P45984 424 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 RAB15P59190 212 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 PLOD1Q02809 727 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CFHR1Q03591 330 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 THOC5Q13769 683 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 NFE2L1Q14494 772 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 SEPT7Q16181 437 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 BBS9Q3SYG4 887 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 DCAF12Q5T6F0 453 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 RNF187Q5TA31 235 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 METRNLQ641Q3 311 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CES3Q6UWW8 571 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ZNF574Q6ZN55 896 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TMPRSS9Q7Z410 1059 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 LRRC6Q86X45 466 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 FAM129CQ86XR2 697 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 PLXDC1Q8IUK5 500 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 LMNTD2Q8IXW0 634 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CFAP206Q8IYR0 622 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CLDN19Q8N6F1 224 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 GPR150Q8NGU9 434 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CALML6Q8TD86 181 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 NCSTNQ92542 709 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 LRRC39Q96DD0 335 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CXorf40BQ96DE9 158 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TEFMQ96QE5 360 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 SLC39A1Q9NY26 324 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 WHRNQ9P202 907 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CPNE7Q9UBL6 633 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 VPS9D1Q9Y2B5 631 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 FAM169AQ9Y6X4 670 aa12.96□□□□□ -0.33
RAB11FIP3-207ENST00000461009 A6NCN8 305 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PRR19A6NJB7 356 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 B4E171 279 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 C9orf172C9J069 976 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PRMT5O14744 637 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 SGTAO43765 313 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 EML2O95834 649 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CCL4P13236 92 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PGAM1P18669 254 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 MPSTP25325 297 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ETV5P41161 510 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 TSPAN7P41732 249 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 RPL21P46778 160 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 DRG2P55039 364 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CAV1Q03135 178 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 DHX9Q08211 1270 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 RPA4Q13156 261 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 HIF1AQ16665 826 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 LONRF1Q17RB8 773 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 SNAP47Q5SQN1 464 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PTRHD1Q6GMV3 140 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 NEPROQ6NW34 567 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 XKR5Q6UX68 686 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ZFAND4Q86XD8 727 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ZNF761Q86XN6 746 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 RBM12BQ8IXT5 1001 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 EBNA1BP2Q99848 306 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ARHGAP9Q9BRR9 750 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 DDA1Q9BW61 102 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 UCK1Q9HA47 277 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PCDHGA3Q9Y5H0 932 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 HEBP2Q9Y5Z4 205 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 MRFAP1Q9Y605 127 aa12.95□□□□□ -0.34
RAB11FIP3-207ENST00000461009 BPTFQ12830 3046 aa12.94□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PTPRQQ9UMZ3 2332 aa12.94□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CTAGE15A4D2H0 777 aa12.94□□□□□ -0.34
RAB11FIP3-207ENST00000461009 EFCAB7A8K855 629 aa12.94□□□□□ -0.34
RAB11FIP3-207ENST00000461009 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms