RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 WWP1Q9H0M0 922 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 OR52A5Q9H2C5 316 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 ANKZF1Q9H8Y5 726 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 POT1Q9NUX5 634 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 SCHIP1Q9P0W5 487 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-209ENST00000460573 KLHL42Q9P2K6 505 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 CPNE7Q9UBL6 633 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 WDR37Q9Y2I8 494 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 ARHGEF17Q96PE2 2063 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-209ENST00000460573 PIKFYVEQ9Y2I7 2098 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 TRBV23OR9-2A0A075B6M9 112 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 FAM159BA6NKW6 160 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 IFRD1O00458 451 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-209ENST00000460573 MYF5P13349 255 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 ITGB6P18564 788 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 GABRB3P28472 473 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 HHEXQ03014 270 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 NAB1Q13506 487 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 BOP1Q14137 746 aaKnown RBP21.97■■□□□ 1.11
C9orf3-209ENST00000460573 PLEKHS1Q5SXH7 462 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-209ENST00000460573 CAPRIN2Q6IMN6 1127 aaKnown RBP21.97■■□□□ 1.11
C9orf3-209ENST00000460573 OTOAQ7RTW8 1153 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 ZNF438Q7Z4V0 828 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 TRIM48Q8IWZ4 208 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 KRT222Q8N1A0 295 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 LILRA3Q8N6C8 439 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-209ENST00000460573 WDR48Q8TAF3 677 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 ZFPM2Q8WW38 1151 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 CXorf40BQ96DE9 158 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 AARSD1Q9BTE6 412 aaKnown RBP21.97■■□□□ 1.11
C9orf3-209ENST00000460573 CDC42EP4Q9H3Q1 356 aaKnown RBP21.97■■□□□ 1.11
C9orf3-209ENST00000460573 UCK1Q9HA47 277 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 NINJ2Q9NZG7 142 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 PSMD13Q9UNM6 376 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 HEBP2Q9Y5Z4 205 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 RNF215Q9Y6U7 377 aa21.97■■□□□ 1.11
C9orf3-209ENST00000460573 IGF2RP11717 2491 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 FAM149AA5PLN7 773 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 GPC4O75487 556 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 VIPP01282 170 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 JUPP14923 745 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 CD9P21926 228 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 SLC19A1P41440 591 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 GPR3P46089 330 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 UBE2IP63279 158 aaKnown RBP21.96■■□□□ 1.11
C9orf3-209ENST00000460573 NR1D2Q14995 579 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 RPE65Q16518 533 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 UGT3A1Q6NUS8 523 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 ZNF549Q6P9A3 640 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 STRA8Q7Z7C7 330 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 LKAAEAR1Q8TD35 194 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 CCDC74AQ96AQ1 378 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 INSM2Q96T92 566 aaPredicted RBP21.96■■□□□ 1.11
C9orf3-209ENST00000460573 FUT8Q9BYC5 575 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 ZNF624Q9P2J8 865 aaPredicted RBP21.96■■□□□ 1.11
C9orf3-209ENST00000460573 TXNDC16Q9P2K2 825 aa21.96■■□□□ 1.11
C9orf3-209ENST00000460573 PPM1DO15297 605 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 NIPSNAP2O75323 286 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 VPS26AO75436 327 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 SLCO2B1O94956 709 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 MCM3P25205 808 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 NDUFS1P28331 727 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 PDHA2P29803 388 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 SKIV2L2P42285 1042 aaKnown RBP21.95■■□□□ 1.1
C9orf3-209ENST00000460573 PREPP48147 710 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 CSE1LP55060 971 aaKnown RBP21.95■■□□□ 1.1
C9orf3-209ENST00000460573 HSPA14Q0VDF9 509 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 BRD3Q15059 726 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 PERM1Q5SV97 790 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 TRMT10CQ7L0Y3 403 aaKnown RBP21.95■■□□□ 1.1
C9orf3-209ENST00000460573 PDZD3Q86UT5 571 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 PROSER1Q86XN7 944 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 SLC22A15Q8IZD6 547 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 FBF1Q8TES7 1133 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 C12orf66Q96MD2 445 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 CPNE1Q99829 537 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 CCDC3Q9BQI4 270 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 COLEC10Q9Y6Z7 277 aa21.95■■□□□ 1.1
C9orf3-209ENST00000460573 FRYQ5TBA9 3013 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 OR52A4PA6NMU1 304 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 MTHFD1P11586 935 aaKnown RBP21.94■■□□□ 1.1
C9orf3-209ENST00000460573 ATP5DP30049 168 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 TTLL9Q3SXZ7 439 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 KBTBD12Q3ZCT8 623 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 TMPRSS12Q86WS5 348 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 CTAGE3PQ8IX95 158 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 MDM1Q8TC05 714 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 RMDN2Q96LZ7 410 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 CYTH2Q99418 400 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 SLC38A3Q99624 504 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 ABCG4Q9H172 646 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 SLC40A1Q9NP59 571 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 SMYD2Q9NRG4 433 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 TAS2R13Q9NYV9 303 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 SLC17A6Q9P2U8 582 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 CDYLQ9Y232 598 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 PSAT1Q9Y617 370 aa21.94■■□□□ 1.1
C9orf3-209ENST00000460573 C1QAP02745 245 aa21.93■■□□□ 1.1
C9orf3-209ENST00000460573 F7P08709 466 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms