RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 TRMT1Q9NXH9 659 aaKnown RBP22.43■■□□□ 1.18
PTPN4-208ENST00000460289 IGSF10Q6WRI0 2623 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.42■■□□□ 1.18
PTPN4-208ENST00000460289 OR5K3A6NET4 321 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 PGRMC1O00264 195 aaKnown RBP22.42■■□□□ 1.18
PTPN4-208ENST00000460289 KIF1CO43896 1103 aaKnown RBP22.42■■□□□ 1.18
PTPN4-208ENST00000460289 KRT14P02533 472 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 PLOD1Q02809 727 aaPredicted RBP22.42■■□□□ 1.18
PTPN4-208ENST00000460289 FOXM1Q08050 763 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 TRIP13Q15645 432 aaPredicted RBP22.42■■□□□ 1.18
PTPN4-208ENST00000460289 ARMC6Q6NXE6 501 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 CYB5D1Q6P9G0 228 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 ACTRT1Q8TDG2 376 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 NKD1Q969G9 470 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 FERD3LQ96RJ6 166 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 OSBPL9Q96SU4 736 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 CD180Q99467 661 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 SIDT1Q9NXL6 827 aaKnown RBP22.42■■□□□ 1.18
PTPN4-208ENST00000460289 PRSS21Q9Y6M0 314 aa22.42■■□□□ 1.18
PTPN4-208ENST00000460289 EFSO43281 561 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 PDHA2P29803 388 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 GPS1Q13098 491 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 IL11RAQ14626 422 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 CYP1B1Q16678 543 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 TTC27Q6P3X3 843 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 ZNF534Q76KX8 674 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 IL22RA1Q8N6P7 574 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 ZSCAN1Q8NBB4 408 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 ACVR1CQ8NER5 493 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 ELMO1Q92556 727 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 MVB12BQ9H7P6 319 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 SEMA5BQ9P283 1151 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 CACNA1GO43497 2377 aa22.41■■□□□ 1.18
PTPN4-208ENST00000460289 EIF4E1BA6NMX2 242 aaKnown RBP22.4■■□□□ 1.18
PTPN4-208ENST00000460289 ERVH48-1M5A8F1 160 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 CES2O00748 559 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 ATXN7O15265 892 aaPredicted RBP22.4■■□□□ 1.18
PTPN4-208ENST00000460289 NELFEP18615 380 aaKnown RBP22.4■■□□□ 1.18
PTPN4-208ENST00000460289 COILP38432 576 aaPredicted RBP22.4■■□□□ 1.18
PTPN4-208ENST00000460289 DNTTIP2Q5QJE6 756 aaKnown RBP22.4■■□□□ 1.18
PTPN4-208ENST00000460289 ARMC3Q5W041 872 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 CCDC137Q6PK04 289 aaKnown RBP22.4■■□□□ 1.18
PTPN4-208ENST00000460289 OR4E2Q8NGC2 313 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 LCN9Q8WX39 176 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 TFGQ92734 400 aaPredicted RBP22.4■■□□□ 1.18
PTPN4-208ENST00000460289 KIFC1Q9BW19 673 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 TSSK1BQ9BXA7 367 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 SPRY4Q9C004 299 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 MRM3Q9HC36 420 aaKnown RBP22.4■■□□□ 1.18
PTPN4-208ENST00000460289 APMAPQ9HDC9 416 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 TREX1Q9NSU2 369 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 CATSPERZQ9NTU4 200 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 PILRAQ9UKJ1 303 aa22.4■■□□□ 1.18
PTPN4-208ENST00000460289 GOLGA6L10A0A0M3HER8 536 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 UBA6A0AVT1 1052 aaPredicted RBP22.39■■□□□ 1.17
PTPN4-208ENST00000460289 OR6C74A6NCV1 312 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 TK2O00142 265 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 CD3EAPO15446 510 aaKnown RBP22.39■■□□□ 1.17
PTPN4-208ENST00000460289 OR1I1O60431 355 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 RAD1O60671 282 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 MGAT1P26572 445 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 MAP4P27816 1152 aaKnown RBP22.39■■□□□ 1.17
PTPN4-208ENST00000460289 MAGEA6P43360 314 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 PREPP48147 710 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 TTPAP49638 278 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 VPS41P49754 854 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 CRADDP78560 199 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 PRKAA1Q13131 559 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 VASH2Q86V25 355 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 KMT5CQ86Y97 462 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 CACNA2D3Q8IZS8 1091 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 CARFQ8N187 725 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 COG1Q8WTW3 980 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 BBC3Q96PG8 261 aaPredicted RBP22.39■■□□□ 1.17
PTPN4-208ENST00000460289 OR6C1Q96RD1 312 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 TRIT1Q9H3H1 467 aaKnown RBP22.39■■□□□ 1.17
PTPN4-208ENST00000460289 SRMSQ9H3Y6 488 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 SNX12Q9UMY4 172 aa22.39■■□□□ 1.17
PTPN4-208ENST00000460289 IGHV5-51A0A0C4DH38 117 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 TCRBV7S3A2A0A539 114 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 TLCD2A6NGC4 264 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 MATN2O00339 956 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 ARL4DP49703 201 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 PPP1CAP62136 330 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 SH3BP2P78314 561 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 KCNJ11Q14654 390 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 SYTL3Q4VX76 610 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 NLGN4XQ8N0W4 816 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 PHC3Q8NDX5 983 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 NLGN4YQ8NFZ3 816 aaPredicted RBP22.38■■□□□ 1.17
PTPN4-208ENST00000460289 GRK7Q8WTQ7 553 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 WBP1Q96G27 269 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 SLC41A2Q96JW4 573 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 PDLIM2Q96JY6 352 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 MAP3K3Q99759 626 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 TFB2MQ9H5Q4 396 aaKnown RBP22.38■■□□□ 1.17
PTPN4-208ENST00000460289 TMEM184BQ9Y519 407 aaPredicted RBP22.38■■□□□ 1.17
PTPN4-208ENST00000460289 SDK2Q58EX2 2172 aa22.38■■□□□ 1.17
PTPN4-208ENST00000460289 SLC5A10A0PJK1 596 aa22.37■■□□□ 1.17
PTPN4-208ENST00000460289 STK17BO94768 372 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms