RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CCNYL3P0C7X3 344 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 COL6A1P12109 1028 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 HTR7P34969 479 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 GRM5P41594 1212 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 PTGIRP43119 386 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 PLK1P53350 603 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 LIMK2P53671 638 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 PRKD1Q15139 912 aaPredicted RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 FAM189A2Q15884 450 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 DUS1LQ6P1R4 473 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 ULK3Q6PHR2 472 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CYP20A1Q6UW02 462 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ZNF567Q8N184 647 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 LINC00471Q8N535 108 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 FIBCD1Q8N539 461 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ZNF614Q8N883 585 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 WNT8BQ93098 351 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 FAXDC2Q96IV6 333 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 FZD8Q9H461 694 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 TBC1D14Q9P2M4 693 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CNOT6Q9ULM6 557 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 ATP6AP2A0A1C7CYW4 349 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 IQCF3P0C7M6 154 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 UROSP10746 265 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 FOSL2P15408 326 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 EPCAMP16422 314 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 SYN1P17600 705 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 GNPDA1P46926 289 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 SULT2A1Q06520 285 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 INTS6LQ5JSJ4 861 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 COLEC12Q5KU26 742 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 OTOP2Q7RTS6 562 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ZC3H7AQ8IWR0 971 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 TMEM192Q8IY95 271 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 OR52K2Q8NGK3 314 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CSGALNACT1Q8TDX6 532 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 UROC1Q96N76 676 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CLCC1Q96S66 551 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CPXM1Q96SM3 734 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ACTR6Q9GZN1 396 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CRISPLD2Q9H0B8 497 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CDT1Q9H211 546 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 PACSIN3Q9UKS6 424 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 VWA7Q9Y334 891 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 PRODHO43272 600 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 TLL1O43897 1013 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 PTTG1O95997 202 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 NPPAP01160 153 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 PRPS2P11908 318 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 IL32P24001 234 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 LCN1P31025 176 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 FMO4P31512 558 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 BIKQ13323 160 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 DPY19L1Q2PZI1 675 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ALG11Q2TAA5 492 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 TIGD2Q4W5G0 525 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 NOMO2Q5JPE7 1267 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 EFCAB3Q8N7B9 438 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 PHC3Q8NDX5 983 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 HDAC2Q92769 488 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 ISOC1Q96CN7 298 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CCDC32Q9BV29 185 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 MECRQ9BV79 373 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CNPPD1Q9BV87 410 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 USP29Q9HBJ7 922 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 IL23AQ9NPF7 189 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 EIF2B3Q9NR50 452 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 POLR1DQ9Y2S0 133 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 A0A0U1RQJ8 604 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 HTR3EA5X5Y0 456 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 M0R233 179 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 DENRO43583 198 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 EDIL3O43854 480 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ENTPD6O75354 484 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 RECQL4O94761 1208 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CCNB2O95067 398 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 MAP3K6O95382 1288 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 DNTTP04053 509 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 MAGP20916 626 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 MPSTP25325 297 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 CDH5P33151 784 aaPredicted RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 CTBP2P56545 445 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 MYBPC1Q00872 1141 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 MPP2Q14168 576 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 SIM2Q14190 667 aaPredicted RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 RNASEH2BQ5TBB1 312 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 SLC26A9Q7LBE3 791 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ZBTB46Q86UZ6 589 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 NPAS4Q8IUM7 802 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 LSM14AQ8ND56 463 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 GFM1Q96RP9 751 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 ABCB9Q9NP78 766 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 OAS3Q9Y6K5 1087 aaKnown RBP9.62□□□□□ -0.87
UFD1-205ENST00000459854 MAU2Q9Y6X3 613 aa9.62□□□□□ -0.87
UFD1-205ENST00000459854 KCNU1A8MYU2 1149 aa9.61□□□□□ -0.87
UFD1-205ENST00000459854 CYB561D2O14569 222 aa9.61□□□□□ -0.87
UFD1-205ENST00000459854 C2P06681 752 aa9.61□□□□□ -0.87
UFD1-205ENST00000459854 NR2F1P10589 423 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms