RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 C2P06681 752 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SLC35E2BP0CK96 405 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 PCNAP12004 261 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 BCKDHBP21953 392 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 IGFALSP35858 605 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 RPS9P46781 194 aaKnown RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 SEPHS1P49903 392 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SERPINB9P50453 376 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SUOXP51687 545 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 DCDC1P59894 354 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 DLG1Q12959 904 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 TPRG1LQ5T0D9 272 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 TMEM164Q5U3C3 297 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 LAYNQ6UX15 382 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 NCCRP1Q6ZVX7 275 aaPredicted RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 CYP2U1Q7Z449 544 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 KBTBD6Q86V97 674 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 GRAMD2AQ8IUY3 354 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 NRSN1Q8IZ57 195 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 RASGEF1AQ8N9B8 481 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 TP53I13Q8NBR0 393 aaPredicted RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 GLYATL1Q969I3 302 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 BIRC7Q96CA5 298 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 GIMAP5Q96F15 307 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 COPS8Q99627 209 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 GPR21Q99679 349 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 RTKNQ9BST9 563 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 AARSD1Q9BTE6 412 aaKnown RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 ZSCAN5AQ9BUG6 496 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 TRIM4Q9C037 500 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 OR2AG1Q9H205 316 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 WSB2Q9NYS7 404 aaPredicted RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 FBXO4Q9UKT5 387 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SCML1Q9UN30 329 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 ANGPTL3Q9Y5C1 460 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 A0A096LPK6 155 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 TMEM202A6NGA9 273 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 RHOBTB1O94844 696 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 FUCA1P04066 466 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 SP9P0CG40 484 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 CHRM3P20309 590 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 GLRBP48167 497 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 ST13P50502 369 aaKnown RBP10.15□□□□□ -0.78
USP39-210ENST00000459775 ITGA9Q13797 1035 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 RSPO4Q2I0M5 234 aaPredicted RBP10.15□□□□□ -0.78
USP39-210ENST00000459775 GPR33Q49SQ1 333 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 C1orf210Q8IVY1 113 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 RIBC1Q8N443 379 aaPredicted RBP10.15□□□□□ -0.78
USP39-210ENST00000459775 LILRA3Q8N6C8 439 aaPredicted RBP10.15□□□□□ -0.78
USP39-210ENST00000459775 KCTD4Q8WVF5 259 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 SNX19Q92543 992 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 TM7SF3Q9NS93 570 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 INTS10Q9NVR2 710 aaKnown RBP10.15□□□□□ -0.78
USP39-210ENST00000459775 NSMCE4AQ9NXX6 385 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 ZDHHC3Q9NYG2 299 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 IKZF3Q9UKT9 509 aa10.15□□□□□ -0.78
USP39-210ENST00000459775 RUVBL2Q9Y230 463 aaKnown RBP10.15□□□□□ -0.78
USP39-210ENST00000459775 TRPM6Q9BX84 2022 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 CACNA1IQ9P0X4 2223 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 TMEM120BA0PK00 339 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 PRMT5O14744 637 aaPredicted RBP10.15□□□□□ -0.79
USP39-210ENST00000459775 PKMP14618 531 aaKnown RBP10.15□□□□□ -0.79
USP39-210ENST00000459775 ALOX15P16050 662 aaPredicted RBP10.15□□□□□ -0.79
USP39-210ENST00000459775 PBLDP30039 288 aaPredicted RBP10.15□□□□□ -0.79
USP39-210ENST00000459775 CD6P30203 668 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 ATP6V1E1P36543 226 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 PTGER3P43115 390 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 RAD52P43351 418 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 ASMTP46597 345 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 FNTBP49356 437 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 CD83Q01151 205 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 DPTQ07507 201 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 PLA2G4EQ3MJ16 856 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 AARS2Q5JTZ9 985 aaKnown RBP10.15□□□□□ -0.79
USP39-210ENST00000459775 LGSNQ5TDP6 509 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 PTRHD1Q6GMV3 140 aaKnown RBP10.15□□□□□ -0.79
USP39-210ENST00000459775 PAQR3Q6TCH7 311 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 CRTC3Q6UUV7 619 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 MAML2Q8IZL2 1156 aaPredicted RBP10.15□□□□□ -0.79
USP39-210ENST00000459775 BANPQ8N9N5 519 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 OR2T34Q8NGX1 318 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 CLPBQ9H078 707 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 PREBQ9HCU5 417 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 MRPL40Q9NQ50 206 aaKnown RBP10.15□□□□□ -0.79
USP39-210ENST00000459775 ACSS2Q9NR19 701 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 FKBP14Q9NWM8 211 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 ATXN10Q9UBB4 475 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 NCDNQ9UBB6 729 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 PCDHGA2Q9Y5H1 932 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 R4GN57 208 aa10.15□□□□□ -0.79
USP39-210ENST00000459775 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 RGSL1A5PLK6 1076 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 LATO43561 262 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 TYROBPO43914 113 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 ASMTLO95671 621 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 STMN1P16949 149 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 ZNF8P17098 575 aaPredicted RBP10.14□□□□□ -0.79
USP39-210ENST00000459775 NR1D1P20393 614 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 FDXRP22570 491 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 GALNSP34059 522 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms