RNA–Protein interactions for RNA: ENST00000458499.5

VGLL4-215, Transcript of vestigial like family member 4, human

TSL 3

Gene VGLL4, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VGLL4-215	ENST00000458499	VPS41	P49754	854 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	GSTM4	Q03013	218 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	SEMA3A	Q14563	771 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	BRD3	Q15059	726 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	TAF1B	Q53T94	588 aa	Predicted RBP	13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	PCID2	Q5JVF3	399 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	ZNF449	Q6P9G9	518 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	NAPRT	Q6XQN6	538 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	CERS6	Q6ZMG9	384 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	OOSP2	Q86WS3	158 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	CACNA2D3	Q8IZS8	1091 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	RASGEF1C	Q8N431	466 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	ACVR1C	Q8NER5	493 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	OR4E2	Q8NGC2	313 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	ELMO1	Q92556	727 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	TTC9	Q92623	222 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	ELMO2	Q96JJ3	720 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	TTC1	Q99614	292 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	MAP3K3	Q99759	626 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	SPRY4	Q9C004	299 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	HRASLS2	Q9NWW9	162 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	PCDHGA4	Q9Y5G9	962 aa		13.61	□□□□□ -0.23
VGLL4-215	ENST00000458499	TCRBV7S3A2	A0A539	114 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	ZSCAN12	O43309	604 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	OR56A5	P0C7T3	313 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	LIF	P15018	202 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	NELFE	P18615	380 aa	Known RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	MGAT1	P26572	445 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	ARCN1	P48444	511 aa	Known RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	CD151	P48509	253 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	NPY2R	P49146	381 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	GPS1	Q13098	491 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	RPA4	Q13156	261 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	KCNAB1	Q14722	419 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	FASTKD1	Q53R41	847 aa	Known RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	ARMC6	Q6NXE6	501 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	TIPARP	Q7Z3E1	657 aa	Known RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	LDB1	Q86U70	411 aa	Predicted RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	NLGN4X	Q8N0W4	816 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	SLC35F6	Q8N357	371 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	ZSCAN1	Q8NBB4	408 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	COG1	Q8WTW3	980 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	LCN9	Q8WX39	176 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	UBXN4	Q92575	508 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	PEX13	Q92968	403 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	MAGOHB	Q96A72	148 aa	Known RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	SLC41A2	Q96JW4	573 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	NRTN	Q99748	197 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	ULBP3	Q9BZM4	244 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	IL22	Q9GZX6	179 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	TREX1	Q9NSU2	369 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	TRMT1	Q9NXH9	659 aa	Known RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	BFAR	Q9NZS9	450 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	SEMA5B	Q9P283	1151 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	CACNA1G	O43497	2377 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	NBEA	Q8NFP9	2946 aa		13.6	□□□□□ -0.23
VGLL4-215	ENST00000458499	BPTF	Q12830	3046 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	UBA6	A0AVT1	1052 aa	Predicted RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	TLCD2	A6NGC4	264 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	TK2	O00142	265 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	AP3B1	O00203	1094 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	PGRMC1	O00264	195 aa	Known RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	QSOX1	O00391	747 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	LIN7A	O14910	233 aa	Predicted RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	KRT14	P02533	472 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	POLR2C	P19387	275 aa	Predicted RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	TPSB2	P20231	275 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	NMBR	P28336	390 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	ARL4D	P49703	201 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	KPNA2	P52292	529 aa	Known RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	CYP4F2	P78329	520 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	CDK16	Q00536	496 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	PRKG2	Q13237	762 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	BOP1	Q14137	746 aa	Known RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	IL11RA	Q14626	422 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	TPSAB1	Q15661	275 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	SYTL3	Q4VX76	610 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	AARS2	Q5JTZ9	985 aa	Known RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	LRRC8B	Q6P9F7	803 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	RASGRP3	Q8IV61	690 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	SIDT2	Q8NBJ9	832 aa	Known RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	LSM14A	Q8ND56	463 aa	Known RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	TFG	Q92734	400 aa	Predicted RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	SGSM3	Q96HU1	749 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	OSBPL9	Q96SU4	736 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	CD180	Q99467	661 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	HGH1	Q9BTY7	390 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	SRMS	Q9H3Y6	488 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	CATSPERZ	Q9NTU4	200 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	SYBU	Q9NX95	663 aa		13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.59	□□□□□ -0.23
VGLL4-215	ENST00000458499	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.58	□□□□□ -0.24
VGLL4-215	ENST00000458499	GSAP	A4D1B5	854 aa		13.58	□□□□□ -0.24
VGLL4-215	ENST00000458499	CD3EAP	O15446	510 aa	Known RBP	13.58	□□□□□ -0.24
VGLL4-215	ENST00000458499	KIF5C	O60282	957 aa		13.58	□□□□□ -0.24
VGLL4-215	ENST00000458499	AVIL	O75366	819 aa		13.58	□□□□□ -0.24
VGLL4-215	ENST00000458499	DLGAP3	O95886	979 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms