RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 CCDC74AQ96AQ1 378 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 INSM2Q96T92 566 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CCDC3Q9BQI4 270 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 FAM129AQ9BZQ8 928 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 OR52A5Q9H2C5 316 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 COG4Q9H9E3 785 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 VPS37BQ9H9H4 285 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 SARS2Q9NP81 518 aaKnown RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 FBXO6Q9NRD1 293 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 LATS2Q9NRM7 1088 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CPNE7Q9UBL6 633 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 PSMD13Q9UNM6 376 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 WASF3Q9UPY6 502 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CDYLQ9Y232 598 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 WDFY3Q8IZQ1 3526 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CFAP47Q6ZTR5 3102 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 ACACAQ13085 2346 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 A0A1W2PQM1 296 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 UBA6A0AVT1 1052 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 OR52A4PA6NMU1 304 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 RHPN2P1A8MT19 583 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 PDZK1P1A8MUH7 402 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 F8W8V4 182 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 NTN3O00634 580 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 LIN7AO14910 233 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 HYAL3O43820 417 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 TRIM16O95361 564 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 ESR1P03372 595 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 RHOXF2BP0C7M4 288 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 PKMP14618 531 aaKnown RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 ITGB6P18564 788 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 ACADLP28330 430 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 GPR3P46089 330 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 CD151P48509 253 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 EIF3BP55884 814 aaKnown RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 CCL7P80098 99 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 MPP1Q00013 466 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 INSM1Q01101 510 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 HHEXQ03014 270 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 RPA4Q13156 261 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 RPE65Q16518 533 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 CDCP2Q5VXM1 449 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 PTRHD1Q6GMV3 140 aaKnown RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 ZNF549Q6P9A3 640 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 CNSTQ6PJW8 725 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 KIAA0408Q6ZU52 694 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 C3orf62Q6ZUJ4 267 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 GALNT7Q86SF2 657 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 RELL1Q8IUW5 271 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 CACTIN-AS1Q8N1I8 211 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 Q8N9G6 341 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-206ENST00000457035 ELMO1Q92556 727 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 C9orf72Q96LT7 481 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 RMDN2Q96LZ7 410 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 RHOXF2Q9BQY4 288 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 FAM167BQ9BTA0 163 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 WWP1Q9H0M0 922 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 UCK1Q9HA47 277 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 LRRC4CQ9HCJ2 640 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 SLC40A1Q9NP59 571 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 GALPQ9UBC7 116 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 FAM8A1Q9UBU6 413 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 GNPTGQ9UJJ9 305 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 MED16Q9Y2X0 877 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 PCDHB1Q9Y5F3 818 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 CEP295Q9C0D2 2601 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 HEATR5BQ9P2D3 2071 aa9.83□□□□□ -0.84
ATG4A-206ENST00000457035 ADAMTS20P59510 1910 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 AKAP13Q12802 2813 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 FAM221BA6H8Z2 402 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 H3BMM5 538 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 NIPSNAP2O75323 286 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 SLCO2B1O94956 709 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 VIPP01282 170 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 C1QAP02745 245 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 GSTA2P09210 222 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 ALDH4A1P30038 563 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 HALP42357 657 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 PREPP48147 710 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 CLDN6P56747 220 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 OR1D5P58170 312 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 TIAL1Q01085 375 aaKnown RBP eCLIP9.82□□□□□ -0.84
ATG4A-206ENST00000457035 PLOD1Q02809 727 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-206ENST00000457035 MGAT5Q09328 741 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 SQSTM1Q13501 440 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 CUL1Q13616 776 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 BRD3Q15059 726 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 ZNF449Q6P9G9 518 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 TMEM26Q6ZUK4 368 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 TMPRSS7Q7RTY8 843 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 SPRED1Q7Z699 444 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 CCDC25Q86WR0 208 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 TMPRSS12Q86WS5 348 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 ZNF761Q86XN6 746 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-206ENST00000457035 VRK3Q8IV63 474 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 IFT20Q8IY31 132 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 AVL9Q8NBF6 648 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 GABPB2Q8TAK5 448 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-206ENST00000457035 ZFPM2Q8WW38 1151 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 ASZ1Q8WWH4 475 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms