RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 INPP4BO15327 924 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 KATNA1O75449 491 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 TRIM16O95361 564 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 UMPSP11172 480 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 NCK1P16333 377 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 PHKG1Q16816 387 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 DGKKQ5KSL6 1271 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 PRR23BQ6ZRT6 265 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 SPRED1Q7Z699 444 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 TSPAN14Q8NG11 270 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 UBTD2Q8WUN7 234 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 RC3H2Q9HBD1 1191 aaKnown RBP18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 PNPLA3Q9NST1 481 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 LSM7Q9UK45 103 aaKnown RBP18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 H3BNH8 94 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 ACOX3O15254 700 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 H6PDO95479 791 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 CDH2P19022 906 aaPredicted RBP18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 MSH3P20585 1137 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 HRH2P25021 359 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 ARL1P40616 181 aaPredicted RBP18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 CASP2P42575 452 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 CYP4F8P98187 520 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 NR6A1Q15406 480 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 CYP51A1Q16850 503 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 AP5B1Q2VPB7 878 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 GPR33Q49SQ1 333 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 MPP7Q5T2T1 576 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 GRAMD4Q6IC98 578 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 GAREM2Q75VX8 874 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 TMCO2Q7Z6W1 182 aaPredicted RBP18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 BBS7Q8IWZ6 715 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 TRIML2Q8N7C3 387 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 HBEGFQ99075 208 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 CD244Q9BZW8 370 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 TNKS2Q9H2K2 1166 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 ATP13A3Q9H7F0 1226 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 SPG21Q9NZD8 308 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 INTS6Q9UL03 887 aaKnown RBP18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 USP22Q9UPT9 525 aa18.06■□□□□ 0.48
SEMA3B-209ENST00000456560 KANSL1LA0AUZ9 987 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 AGAP14A8MT82 685 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 IFRD1O00458 451 aaPredicted RBP18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 GUCA1CO95843 209 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 IGSF6O95976 241 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 FCGR1AP12314 374 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 HMOX2P30519 316 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 CD70P32970 193 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 SPAM1P38567 509 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 TLE2Q04725 743 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 KIAA0040Q15053 153 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 RFTN2Q52LD8 501 aaPredicted RBP18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 SULT1C3Q6IMI6 304 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 SLC39A5Q6ZMH5 540 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 RNF165Q6ZSG1 346 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 NXPE1Q8N323 547 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 FIBINQ8TAL6 211 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 LYSMD1Q96S90 227 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 HTATIP2Q9BUP3 242 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 C9orf16Q9BUW7 83 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 LRRC3Q9BY71 257 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 LATS2Q9NRM7 1088 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 KIAA1522Q9P206 1035 aaPredicted RBP18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 CFAP97Q9P2B7 532 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 ZMYM5Q9UJ78 669 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 CRLS1Q9UJA2 301 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 GMEB1Q9Y692 573 aa18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 ZFC3H1O60293 1989 aaKnown RBP18.05■□□□□ 0.48
SEMA3B-209ENST00000456560 A0A0J9YVX5 310 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 TEX28O15482 410 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 TPST1O60507 370 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 RSL1D1O76021 490 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 JAK1P23458 1154 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 RFC2P35250 354 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 PTPN5P54829 565 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 OR4D2P58180 307 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 SLC7A9P82251 487 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 DCTN2Q13561 401 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 PLEKHG6Q3KR16 790 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 AASDHQ4L235 1098 aaPredicted RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 MPPE1Q53F39 396 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 METTL3Q86U44 580 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 PROSER1Q86XN7 944 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 TTC16Q8NEE8 873 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 GAB3Q8WWW8 586 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 LZICQ8WZA0 190 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 BIRC7Q96CA5 298 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 RHBDF1Q96CC6 855 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 LMLNQ96KR4 655 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 RPL10LQ96L21 214 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 RPF2Q9H7B2 306 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 DNAAF2Q9NVR5 837 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 RHBDL2Q9NX52 303 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 RSL24D1Q9UHA3 163 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 ANAPC2Q9UJX6 822 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 ZNF510Q9Y2H8 683 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 POLR3HQ9Y535 204 aaPredicted RBP18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 RASAL1O95294 804 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 GABRR2P28476 465 aa18.04■□□□□ 0.48
SEMA3B-209ENST00000456560 PLOD1Q02809 727 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms