RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 NEPROQ6NW34 567 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 SLC23A3Q6PIS1 610 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 NUDT18Q6ZVK8 323 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 TRMT11Q7Z4G4 463 aaKnown RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 CMC1Q7Z7K0 106 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 MMAAQ8IVH4 418 aaKnown RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 PPHLN1Q8NEY8 458 aaKnown RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 HEXDCQ8WVB3 486 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 RNF34Q969K3 372 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 SMC6Q96SB8 1091 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 UHRF1Q96T88 793 aaPredicted RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 PLCD4Q9BRC7 762 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 SLC12A9Q9BXP2 914 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 COL25A1Q9BXS0 654 aaPredicted RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 RSPO3Q9BXY4 272 aaPredicted RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 ACTL8Q9H568 366 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 LMAN1LQ9HAT1 526 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 PIDD1Q9HB75 910 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 TAS2R1Q9NYW7 299 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 ZNF624Q9P2J8 865 aaPredicted RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 DCDC2Q9UHG0 476 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 NBEAQ8NFP9 2946 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 ASPDHA6ND91 283 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 GOLGA6L10A6NI86 522 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 VILLO15195 856 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 GSC2O15499 205 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 NPHS1O60500 1241 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 GLRA3O75311 464 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 SNUPNO95149 360 aaKnown RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 CRTAMO95727 393 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 CSF2P04141 144 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 C2P06681 752 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 CELA2BP08218 269 aaPredicted RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 ATP1B2P14415 290 aaPredicted RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 NBL1P41271 181 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 MSH2P43246 934 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 YPEL5P62699 121 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 RPS21P63220 83 aaKnown RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 ZNF235Q14590 738 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 CLCA4Q14CN2 919 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 ALG11Q2TAA5 492 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 ZNF678Q5SXM1 525 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 FAM45BPQ6NSW5 357 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 GSTA5Q7RTV2 222 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 PIP4P1Q86T03 277 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 ALYREFQ86V81 257 aaKnown RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 CCDC25Q86WR0 208 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 C10orf107Q8IVU9 208 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.85□□□□□ -1.63
RIF1-207ENST00000454583 SIX5Q8N196 739 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 GPR156Q8NFN8 814 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 GDAP1Q8TB36 358 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 FAM45AQ8TCE6 357 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 GAB3Q8WWW8 586 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 ULK4Q96C45 1275 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 RHBDF1Q96CC6 855 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 HS3ST6Q96QI5 342 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 RUFY1Q96T51 708 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 RIOK2Q9BVS4 552 aaKnown RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 TMEM120AQ9BXJ8 343 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 NMUR2Q9GZQ4 415 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 DPEP2Q9H4A9 486 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 RMI1Q9H9A7 625 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 MLXIPLQ9NP71 852 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 FBXO6Q9NRD1 293 aaPredicted RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 IARS2Q9NSE4 1012 aaKnown RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 THAP1Q9NVV9 213 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 NSMCE4AQ9NXX6 385 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 PCTPQ9UKL6 214 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 ARID1BQ8NFD5 2236 aaPredicted RBP4.85□□□□□ -1.63
RIF1-207ENST00000454583 ITPR1Q14643 2758 aa4.85□□□□□ -1.63
RIF1-207ENST00000454583 CACNA1EQ15878 2313 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 A0A087X1B8 175 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 A0A1W2PNU3 283 aaPredicted RBP4.84□□□□□ -1.63
RIF1-207ENST00000454583 H0Y8X5 98 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 STX16-NPEPL1H3BU86 382 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 STX16O14662 325 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ACOT8O14734 319 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 FOXS1O43638 330 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 KERAO60938 352 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 C1orf105O95561 183 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 C9P02748 559 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 HOXB2P14652 356 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ACPPP15309 386 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 KRT15P19012 456 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 PTPN6P29350 595 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 SERPINB5P36952 375 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 CETN2P41208 172 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 SEMG2Q02383 582 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 IFFO1Q0D2I5 559 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ELP6Q0PNE2 266 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 GRSF1Q12849 480 aaKnown RBP eCLIP4.84□□□□□ -1.63
RIF1-207ENST00000454583 NFATC4Q14934 902 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 HERC3Q15034 1050 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 ZIC1Q15915 447 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 PHKG1Q16816 387 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 PRSS53Q2L4Q9 553 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 BBS9Q3SYG4 887 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 PLK5Q496M5 336 aa4.84□□□□□ -1.63
RIF1-207ENST00000454583 GLIPR1L2Q4G1C9 344 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms