RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SLC41A2Q96JW4 573 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 RMDN2Q96LZ7 410 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 SLC25A18Q9H1K4 315 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 ADNPQ9H2P0 1102 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 PIH1D1Q9NWS0 290 aaKnown RBP12.57□□□□□ -0.4
CHD3-206ENST00000452447 SEMA5BQ9P283 1151 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 PCDHB3Q9Y5E6 796 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 TENM4Q6N022 2769 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 TRBV5-4A0A0C4DH59 114 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 OR6C74A6NCV1 312 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 E7EVH7 732 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 SPAG6O75602 509 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 FOLR1P15328 257 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 ITGB6P18564 788 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 TCN2P20062 427 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 POLE2P56282 527 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 HSD11B2P80365 405 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 CACNG1Q06432 222 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 CDC20Q12834 499 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 CDH17Q12864 832 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 KCNAB1Q14722 419 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 CAPRIN2Q6IMN6 1127 aaKnown RBP12.56□□□□□ -0.4
CHD3-206ENST00000452447 BPHLQ86WA6 291 aaPredicted RBP12.56□□□□□ -0.4
CHD3-206ENST00000452447 LILRA3Q8N6C8 439 aaPredicted RBP12.56□□□□□ -0.4
CHD3-206ENST00000452447 OR4E2Q8NGC2 313 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 FERD3LQ96RJ6 166 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 FRMD8P1Q9BZ68 369 aaPredicted RBP12.56□□□□□ -0.4
CHD3-206ENST00000452447 COG4Q9H9E3 785 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 CROTQ9UKG9 612 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 PADI1Q9ULC6 663 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 ZNF148Q9UQR1 794 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 IGLV3-16A0A075B6K0 115 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 CCDC78A2IDD5 438 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 ERI2A8K979 691 aaKnown RBP12.56□□□□□ -0.4
CHD3-206ENST00000452447 ZBTB11O95625 1053 aaPredicted RBP12.56□□□□□ -0.4
CHD3-206ENST00000452447 EBLN1P0CF75 366 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 MSNP26038 577 aaKnown RBP12.56□□□□□ -0.4
CHD3-206ENST00000452447 NSG1P42857 185 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 GSDMDP57764 484 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 LAMB3Q13751 1172 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 TMTC4Q5T4D3 741 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 CARFQ8N187 725 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 CLDN19Q8N6F1 224 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 ACVR1CQ8NER5 493 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 OR52K1Q8NGK4 314 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 LCN9Q8WX39 176 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 FCRL4Q96PJ5 515 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 FGF21Q9NSA1 209 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 SMARCAL1Q9NZC9 954 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 KCND3Q9UK17 655 aa12.56□□□□□ -0.4
CHD3-206ENST00000452447 RP1L1Q8IWN7 2480 aaPredicted RBP12.55□□□□□ -0.4
CHD3-206ENST00000452447 GOLGA6L3A6NEY3 463 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 MROH6A6NGR9 719 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 MATN2O00339 956 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 QSOX1O00391 747 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 LIASO43766 372 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 KATNA1O75449 491 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 TIAF1O95411 115 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 GSTM1P09488 218 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 PRSS56P0CW18 603 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 POLR2CP19387 275 aaPredicted RBP12.55□□□□□ -0.4
CHD3-206ENST00000452447 FDFT1P37268 417 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 ARCN1P48444 511 aaKnown RBP12.55□□□□□ -0.4
CHD3-206ENST00000452447 CD151P48509 253 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 TUBB4BP68371 445 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 GSTM4Q03013 218 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 RPA4Q13156 261 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 KCNAB2Q13303 367 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 TUBB2AQ13885 445 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 RPS6KA1Q15418 735 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 DEFB109BQ30KR1 87 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 CCDC38Q502W7 563 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 CRTC2Q53ET0 693 aaPredicted RBP12.55□□□□□ -0.4
CHD3-206ENST00000452447 PWWP2BQ6NUJ5 590 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 PPP1R21Q6ZMI0 780 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 SLC13A5Q86YT5 568 aaPredicted RBP12.55□□□□□ -0.4
CHD3-206ENST00000452447 PIANPQ8IYJ0 282 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 D2HGDHQ8N465 521 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 CCDC89Q8N998 374 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 APOBEC4Q8WW27 367 aaKnown RBP12.55□□□□□ -0.4
CHD3-206ENST00000452447 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHD3-206ENST00000452447 TTC1Q99614 292 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 TUBB2BQ9BVA1 445 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 OR52A5Q9H2C5 316 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 SRMSQ9H3Y6 488 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 ETNK1Q9HBU6 452 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 SOHLH2Q9NX45 425 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 TUBD1Q9UJT1 453 aa12.55□□□□□ -0.4
CHD3-206ENST00000452447 MRPS18BQ9Y676 258 aaKnown RBP12.55□□□□□ -0.4
CHD3-206ENST00000452447 SETXQ7Z333 2677 aaKnown RBP12.54□□□□□ -0.4
CHD3-206ENST00000452447 GSAPA4D1B5 854 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 ARHGAP6O43182 974 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 MAP3K7O43318 606 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 AP2A2O94973 939 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
CHD3-206ENST00000452447 CDH3P22223 829 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 F8A1P23610 371 aa12.54□□□□□ -0.4
CHD3-206ENST00000452447 OAS2P29728 719 aaKnown RBP12.54□□□□□ -0.4
CHD3-206ENST00000452447 PDHA2P29803 388 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms