RNA–Protein interactions for RNA: ENST00000449538.3

HIST1H2BN-202, Transcript of histone cluster 1 H2B family member n, humanhuman

TSL 1 (best)

Gene HIST1H2BN, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BN-202ENST00000449538 ITPKBP27987 946 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 TSPAN7P41732 249 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PREPP48147 710 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 SYTL3Q4VX76 610 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 BROXQ5VW32 411 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 KIAA0930Q6ICG6 404 aaPredicted RBP17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 MRNIPQ6NTE8 343 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 IRGCQ6NXR0 463 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 CES3Q6UWW8 571 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 SYDE1Q6ZW31 735 aaPredicted RBP17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PCGF5Q86SE9 256 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 SDCCAG8Q86SQ7 713 aaPredicted RBP17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 KLHL7Q8IXQ5 586 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 FERD3LQ96RJ6 166 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 MVB12BQ9H7P6 319 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 SLC39A1Q9NY26 324 aa17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 MARCH4Q9P2E8 410 aaPredicted RBP17.05■□□□□ 0.32
HIST1H2BN-202ENST00000449538 FAM237BA0A1B0GVD1 139 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PRMT5O14744 637 aaPredicted RBP17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 KLK10O43240 276 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 RASSF9O75901 435 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 CD82P27701 267 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PDHA2P29803 388 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 RAB15P59190 212 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 BOP1Q14137 746 aaKnown RBP17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 COL28A1Q2UY09 1125 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 RNASEH2BQ5TBB1 312 aaKnown RBP17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 LDB1Q86U70 411 aaPredicted RBP17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PDZD3Q86UT5 571 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 OOSP2Q86WS3 158 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 LRRC6Q86X45 466 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ACVR1CQ8NER5 493 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 JPH3Q8WXH2 748 aaPredicted RBP17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 TFGQ92734 400 aaPredicted RBP17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ART4Q93070 314 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 DDA1Q9BW61 102 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 CARD6Q9BX69 1037 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ASPSCR1Q9BZE9 553 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 OCIAD1Q9NX40 245 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 GNPTGQ9UJJ9 305 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PCDHGA3Q9Y5H0 932 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ADAMTS20P59510 1910 aa17.04■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ANKRD11Q6UB99 2663 aaPredicted RBP17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 OR5K3A6NET4 321 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 C9orf172C9J069 976 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 DNALI1O14645 258 aaPredicted RBP17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ARNTP27540 789 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PTGIRP43119 386 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 MAGEA3P43357 314 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 LEPRP48357 1165 aaKnown RBP17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 UCNP55089 124 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 DR1Q01658 176 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 TLE3Q04726 772 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 DHX34Q14147 1143 aaKnown RBP17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 BRD3Q15059 726 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 DCAF12Q5T6F0 453 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 RNF187Q5TA31 235 aaPredicted RBP17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PTRHD1Q6GMV3 140 aaKnown RBP17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ARMC6Q6NXE6 501 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PRSS42Q7Z5A4 293 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 HOOK3Q86VS8 718 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ZNF669Q96BR6 464 aaPredicted RBP17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 TCF12Q99081 682 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 FOXJ2Q9P0K8 574 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 LHX6Q9UPM6 363 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 MAD1L1Q9Y6D9 718 aa17.03■□□□□ 0.32
HIST1H2BN-202ENST00000449538 SLC5A10A0PJK1 596 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 APOA4P06727 396 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 LIPCP11150 499 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ITGB6P18564 788 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 OGNP20774 298 aaKnown RBP17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 RPS3P23396 243 aaKnown RBP eCLIP17.02■□□□□ 0.323e-12■■■■□ 19.7
HIST1H2BN-202ENST00000449538 CASQ1P31415 396 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ARCN1P48444 511 aaKnown RBP17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 MC2RQ01718 297 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 TMED2Q15363 201 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ANKRD20A4Q4UJ75 823 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 CACHD1Q5VU97 1274 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 IZUMO3Q5VZ72 239 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 FAM92BQ6ZTR7 304 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 C17orf53Q8N3J3 647 aaPredicted RBP17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 BMPERQ8N8U9 685 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ASZ1Q8WWH4 475 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 LCN9Q8WX39 176 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 TEFMQ96QE5 360 aaKnown RBP17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PANX3Q96QZ0 392 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 CD180Q99467 661 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 SRMSQ9H3Y6 488 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 ZNF768Q9H5H4 540 aaKnown RBP17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 FBXO8Q9NRD0 319 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 HRASLS2Q9NWW9 162 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 VPS9D1Q9Y2B5 631 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 PCDHB11Q9Y5F2 797 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 RPS6KL1Q9Y6S9 549 aa17.02■□□□□ 0.32
HIST1H2BN-202ENST00000449538 UBA6A0AVT1 1052 aaPredicted RBP17.01■□□□□ 0.31
HIST1H2BN-202ENST00000449538 OR6C74A6NCV1 312 aa17.01■□□□□ 0.31
HIST1H2BN-202ENST00000449538 GOLGA8KD6RF30 607 aa17.01■□□□□ 0.31
HIST1H2BN-202ENST00000449538 GOLGA8TH3BQL2 631 aa17.01■□□□□ 0.31
HIST1H2BN-202ENST00000449538 KPNA5O15131 536 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms