RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ADIGQ0VDE8 80 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 LHFPL5Q8TAF8 219 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 RNF170Q96K19 258 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 SMOQ99835 787 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 CAB39LQ9H9S4 337 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 IL1RL2Q9HB29 575 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 SCPEP1Q9HB40 452 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 TMEM88BA6NKF7 163 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 INPP4BO15327 924 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF780AO75290 641 aaPredicted RBP13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 SLITRK5O94991 958 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 ASGR1P07306 291 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 HOXB6P17509 224 aaKnown RBP13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 NFKB1P19838 968 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 PCMT1P22061 227 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 MFSD14CQ5VZR4 134 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 TMEM86AQ8N2M4 240 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 TSPEARQ8WU66 669 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 TEKT5Q96M29 485 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 TOR3AQ9H497 397 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 CSNK1G1Q9HCP0 422 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 TAS2R9Q9NYW1 312 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 LEUTXA8MZ59 168 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 INPPL1O15357 1258 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 IPO13O94829 963 aaKnown RBP13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 THP07101 528 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 CBX5P45973 191 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 SMARCB1Q12824 385 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 DGCR6Q14129 220 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 SYCE2Q6PIF2 218 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 AMIGO1Q86WK6 493 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 TBC1D21Q8IYX1 336 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 PYROXD2Q8N2H3 581 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 MIER2Q8N344 545 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 ELMO1Q92556 727 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 PHOX2BQ99453 314 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 BDH2Q9BUT1 245 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 PIH1D1Q9NWS0 290 aaKnown RBP13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 MFHAS1Q9Y4C4 1052 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 PABPN1LA6NDY0 278 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 TMEM233B4DJY2 109 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 SDHDO14521 159 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 TSPAN4O14817 238 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 DLX3O60479 287 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 JCHAINP01591 159 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 IL7P13232 177 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 GABARAPL2P60520 117 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 IRF9Q00978 393 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 EMX1Q04741 257 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 SCAPQ12770 1279 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF404Q494X3 552 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 PNCKQ6P2M8 343 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 HFE2Q6ZVN8 426 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 GPRIN1Q7Z2K8 1008 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 HMGCLL1Q8TB92 370 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 LRRN4Q8WUT4 740 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 LGALS12Q96DT0 336 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZHX1-C8orf76Q96EF9 292 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 MFSD3Q96ES6 412 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 GIMAP5Q96F15 307 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 FCRL3Q96P31 734 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 ANKHQ9HCJ1 492 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 PCDH10Q9P2E7 1040 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 RPLP2P05387 115 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 ST13P50502 369 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 KCNA10Q16322 511 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 CLVS2Q5SYC1 327 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 SYPL2Q5VXT5 272 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 KIAA0930Q6ICG6 404 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 DPY19L3Q6ZPD9 716 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 CLEC4FQ8N1N0 589 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 CHDHQ8NE62 594 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 HERVK_113Q902F9 699 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 TOE1Q96GM8 510 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF300Q96RE9 604 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 AGAP2Q99490 1192 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 MMP27Q9H306 513 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 WASH6PQ9NQA3 447 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZC4H2Q9NQZ6 224 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 ATP6V1HQ9UI12 483 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 PADI3Q9ULW8 664 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 MYBPHLA2RUH7 354 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 ACSL4O60488 711 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 CYP11A1P05108 521 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 AGXTP21549 392 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 RPL9P32969 192 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 TGFBR1P36897 503 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 RHAGQ02094 409 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 CERCAMQ5T4B2 595 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 FAR1Q8WVX9 515 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 RPL10LQ96L21 214 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 CEP41Q9BYV8 373 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 WDCPQ9H6R7 721 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 MEAF6Q9HAF1 191 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms