RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PDK4Q16654 411 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 ALG11Q2TAA5 492 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 FAM83HQ6ZRV2 1179 aaPredicted RBP18.87■□□□□ 0.61
RPS28-202ENST00000449223 RGS9BPQ6ZS82 235 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 CFAP206Q8IYR0 622 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 CCDC63Q8NA47 563 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 RAB3IL1Q8TBN0 382 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 CKAP2Q8WWK9 683 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 CCDC126Q96EE4 140 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 CARS2Q9HA77 564 aaKnown RBP18.87■□□□□ 0.61
RPS28-202ENST00000449223 CYP4F12Q9HCS2 524 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 TM7SF3Q9NS93 570 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 OXSMQ9NWU1 459 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 CPSF2Q9P2I0 782 aaKnown RBP18.87■□□□□ 0.61
RPS28-202ENST00000449223 NPEPPSL1A6NEC2 478 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 H3BM21 787 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 KLK8O60259 260 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 PSIP1O75475 530 aaKnown RBP18.86■□□□□ 0.61
RPS28-202ENST00000449223 ENO2P09104 434 aaPredicted RBP18.86■□□□□ 0.61
RPS28-202ENST00000449223 PBLDP30039 288 aaPredicted RBP18.86■□□□□ 0.61
RPS28-202ENST00000449223 EIF2B5Q13144 721 aaKnown RBP18.86■□□□□ 0.61
RPS28-202ENST00000449223 PLA2G4EQ3MJ16 856 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 PLK5Q496M5 336 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 PARGQ86W56 976 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 OR6Y1Q8NGX8 325 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 MAGEB18Q96M61 343 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 SLC12A9Q9BXP2 914 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 C11orf16Q9NQ32 467 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 ZSCAN32Q9NX65 697 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 TMCO1Q9UM00 188 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 OARD1Q9Y530 152 aa18.86■□□□□ 0.61
RPS28-202ENST00000449223 TNFRSF10AO00220 468 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 KLF11O14901 512 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 VILLO15195 856 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 HRO43593 1189 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 DLX3O60479 287 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 TPBGLP0DKB5 382 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 MYL2P10916 166 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 TAC1P20366 129 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 ATP5F1P24539 256 aaPredicted RBP18.85■□□□□ 0.61
RPS28-202ENST00000449223 MAOBP27338 520 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 ACADLP28330 430 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 PDHA2P29803 388 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 GNPDA1P46926 289 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 PREPP48147 710 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 HK3P52790 923 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 PRKAA2P54646 552 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 IRX4P78413 519 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 CDKL1Q00532 357 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 TGFBIQ15582 683 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 CDKL4Q5MAI5 379 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 CHST15Q7LFX5 561 aaPredicted RBP18.85■□□□□ 0.61
RPS28-202ENST00000449223 PDZD3Q86UT5 571 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 FBXO15Q8NCQ5 510 aaPredicted RBP18.85■□□□□ 0.61
RPS28-202ENST00000449223 DYDC1Q8WWB3 177 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 DLG3Q92796 817 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 PAIP2Q9BPZ3 127 aaKnown RBP18.85■□□□□ 0.61
RPS28-202ENST00000449223 CAPS2Q9BXY5 557 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 RNF112Q9ULX5 631 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 TP53BP1Q12888 1972 aaPredicted RBP18.85■□□□□ 0.61
RPS28-202ENST00000449223 FANCMQ8IYD8 2048 aa18.85■□□□□ 0.61
RPS28-202ENST00000449223 TLR4O00206 839 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 SHOX2O60902 331 aaPredicted RBP18.84■□□□□ 0.61
RPS28-202ENST00000449223 RASGRP1O95267 797 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 SP9P0CG40 484 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 ACP5P13686 325 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 ALDH3A1P30838 453 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 BLKP51451 505 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 AFF3P51826 1226 aaKnown RBP18.84■□□□□ 0.61
RPS28-202ENST00000449223 DNAJB13P59910 316 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 PPARDQ03181 441 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 PEAR1Q5VY43 1037 aaPredicted RBP18.84■□□□□ 0.61
RPS28-202ENST00000449223 LYSMD4Q5XG99 296 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 WASH2PQ6VEQ5 465 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 NUDCD3Q8IVD9 361 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 SLC22A9Q8IVM8 553 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 TRIM42Q8IWZ5 723 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 TSACCQ96A04 125 aaPredicted RBP18.84■□□□□ 0.61
RPS28-202ENST00000449223 MECRQ9BV79 373 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 WASH6PQ9NQA3 447 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 KLC4Q9NSK0 619 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 NUDT4Q9NZJ9 180 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 ADAMTS6Q9UKP5 1117 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 ST14Q9Y5Y6 855 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 USP34Q70CQ2 3546 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 CACNA1EQ15878 2313 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 SRRM3A6NNA2 597 aaPredicted RBP18.84■□□□□ 0.61
RPS28-202ENST00000449223 BCAT2O15382 392 aaPredicted RBP18.84■□□□□ 0.61
RPS28-202ENST00000449223 IPO13O94829 963 aaKnown RBP18.84■□□□□ 0.61
RPS28-202ENST00000449223 KCNA4P22459 653 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 NXPH1P58417 271 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 ANGPT1Q15389 498 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 LIPMQ5VYY2 423 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 UNC5DQ6UXZ4 953 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 GPSM1Q86YR5 675 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 C10orf107Q8IVU9 208 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 RGL4Q8IZJ4 473 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 PDPRQ8NCN5 879 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 MIR1-1HGQ9H1L0 117 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 PARVBQ9HBI1 364 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms