RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 DHX34Q14147 1143 aaKnown RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 MSS51Q4VC12 460 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 SYTL3Q4VX76 610 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 IRGCQ6NXR0 463 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 FAM92BQ6ZTR7 304 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 CLEC14AQ86T13 490 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 FAM129CQ86XR2 697 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 PHC3Q8NDX5 983 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 HNRNPLLQ8WVV9 542 aaKnown RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 USP7Q93009 1102 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 C16orf45Q96MC5 204 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 FERD3LQ96RJ6 166 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 FOXJ2Q9P0K8 574 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 PDP2Q9P2J9 529 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 SLC24A2Q9UI40 661 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 RPS6KL1Q9Y6S9 549 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 ZZEF1O43149 2961 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 ZCWPW2A0A1B0GU75 182 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 SLC5A10A0PJK1 596 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 EFCAB7A8K855 629 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 IFRD1O00458 451 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-204ENST00000446876 PRMT5O14744 637 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-204ENST00000446876 LIN7AO14910 233 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-204ENST00000446876 PRAMEF10O60809 474 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 C9P02748 559 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 GSTM1P09488 218 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 FGF3P11487 239 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-204ENST00000446876 CCR7P32248 378 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 CSTF2P33240 577 aaKnown RBP eCLIP14.46□□□□□ -0.091e-6■■■□□ 19
HDAC4-204ENST00000446876 PPARGP37231 505 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-204ENST00000446876 GSTM4Q03013 218 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 DHX9Q08211 1270 aaKnown RBP14.46□□□□□ -0.09
HDAC4-204ENST00000446876 RPA4Q13156 261 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 KRT33BQ14525 404 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 ZNF789Q5FWF6 425 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 CTSL3PQ5NE16 218 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 SYDE1Q6ZW31 735 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-204ENST00000446876 ARHGAP22Q7Z5H3 698 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 PDZD3Q86UT5 571 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 PLXDC1Q8IUK5 500 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 VRK3Q8IV63 474 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 UNC5BQ8IZJ1 945 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 AGBL5Q8NDL9 886 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 TMEM159Q96B96 161 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 STAMBPL1Q96FJ0 436 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 CRELD1Q96HD1 420 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 C9orf72Q96LT7 481 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 RUNDC3BQ96NL0 473 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 HGH1Q9BTY7 390 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 P2RY12Q9H244 342 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 KIR3DX1Q9H7L2 352 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 AKAP7Q9P0M2 348 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-204ENST00000446876 RNF14Q9UBS8 474 aa14.46□□□□□ -0.09
HDAC4-204ENST00000446876 SDK2Q58EX2 2172 aa14.46□□□□□ -0.1
HDAC4-204ENST00000446876 PKD1L2Q7Z442 2459 aa14.46□□□□□ -0.1
HDAC4-204ENST00000446876 C9orf172C9J069 976 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 BHMG1C9JSJ3 638 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-204ENST00000446876 PAMP19021 973 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 SEPHS1P49903 392 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 ITGA8P53708 1063 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 PRKG2Q13237 762 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 TYSND1Q2T9J0 566 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 BBS9Q3SYG4 887 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 HP1BP3Q5SSJ5 553 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-204ENST00000446876 ZNF470Q6ECI4 717 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 PTRHD1Q6GMV3 140 aaKnown RBP14.45□□□□□ -0.1
HDAC4-204ENST00000446876 MRNIPQ6NTE8 343 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 NEPROQ6NW34 567 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 ZNF449Q6P9G9 518 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 CENPUQ71F23 418 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 PCGF5Q86SE9 256 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 TMEM135Q86UB9 458 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 HOOK3Q86VS8 718 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 IGDCC3Q8IVU1 814 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 SPNS2Q8IVW8 549 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 SPATA4Q8NEY3 305 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 OR5AR1Q8NGP9 310 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 LPGAT1Q92604 370 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 TFGQ92734 400 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-204ENST00000446876 ART4Q93070 314 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 FAM136AQ96C01 138 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 RNF31Q96EP0 1072 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 CARD6Q9BX69 1037 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.45□□□□□ -0.1
HDAC4-204ENST00000446876 GNPTGQ9UJJ9 305 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 CRYL1Q9Y2S2 319 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 HEBP2Q9Y5Z4 205 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 COLEC10Q9Y6Z7 277 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 ZFHX4Q86UP3 3567 aa14.45□□□□□ -0.1
HDAC4-204ENST00000446876 A0A087WV48 116 aa14.44□□□□□ -0.1
HDAC4-204ENST00000446876 MAGEB16A2A368 324 aa14.44□□□□□ -0.1
HDAC4-204ENST00000446876 OR6C74A6NCV1 312 aa14.44□□□□□ -0.1
HDAC4-204ENST00000446876 OR5K3A6NET4 321 aa14.44□□□□□ -0.1
HDAC4-204ENST00000446876 EFCAB8A8MWE9 144 aa14.44□□□□□ -0.1
HDAC4-204ENST00000446876 NIPSNAP2O75323 286 aa14.44□□□□□ -0.1
HDAC4-204ENST00000446876 RASSF9O75901 435 aa14.44□□□□□ -0.1
HDAC4-204ENST00000446876 USP1O94782 785 aa14.44□□□□□ -0.1
HDAC4-204ENST00000446876 SEC31AO94979 1220 aaKnown RBP14.44□□□□□ -0.1
HDAC4-204ENST00000446876 OGNP20774 298 aaKnown RBP14.44□□□□□ -0.1
HDAC4-204ENST00000446876 RPS3P23396 243 aaKnown RBP eCLIP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms