RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 OR6C74A6NCV1 312 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 PYCARD-AS1I3L0S3 204 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 TERTO14746 1132 aaKnown RBP10.59□□□□□ -0.71
SF3A1-203ENST00000444440 TOX3O15405 576 aaPredicted RBP10.59□□□□□ -0.71
SF3A1-203ENST00000444440 NKX2-8O15522 239 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 OR1I1O60431 355 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 KIAA0754O94854 1291 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 EBLN1P0CF75 366 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 FGF5P12034 268 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 ITGB6P18564 788 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 POLR2CP19387 275 aaPredicted RBP10.59□□□□□ -0.71
SF3A1-203ENST00000444440 STIP1P31948 543 aaKnown RBP10.59□□□□□ -0.71
SF3A1-203ENST00000444440 CXCR5P32302 372 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 FDFT1P37268 417 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 STAT5AP42229 794 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 KCNJ1P48048 391 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 CRADDP78560 199 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 NFKB2Q00653 900 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 CACNG1Q06432 222 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 TSTD2Q5T7W7 516 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 GALNT6Q8NCL4 622 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 PHC3Q8NDX5 983 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 LKAAEAR1Q8TD35 194 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 MAIP1Q8WWC4 291 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 HDAC10Q969S8 669 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 MED8Q96G25 268 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 ZDHHC12Q96GR4 267 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 RUFY1Q96T51 708 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 CCM2Q9BSQ5 444 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 RAB6BQ9NRW1 208 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 HRASLS2Q9NWW9 162 aa10.59□□□□□ -0.71
SF3A1-203ENST00000444440 TLN1Q9Y490 2541 aaKnown RBP10.59□□□□□ -0.71
SF3A1-203ENST00000444440 C17orf113A0A1B0GUU1 675 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 TCRBV7S3A2A0A539 114 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 TLCD2A6NGC4 264 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 BTN3A3O00478 584 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 PSMD3O43242 534 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 ZSCAN12O43309 604 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 SPAG6O75602 509 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 ZIC2O95409 532 aaPredicted RBP10.58□□□□□ -0.72
SF3A1-203ENST00000444440 GOT2P00505 430 aaKnown RBP10.58□□□□□ -0.72
SF3A1-203ENST00000444440 ITGB2P05107 769 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 FURINP09958 794 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 TPBGLP0DKB5 382 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 PRKAR1AP10644 381 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 RALBP11234 206 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 MAP4P27816 1152 aaKnown RBP10.58□□□□□ -0.72
SF3A1-203ENST00000444440 OAS2P29728 719 aaKnown RBP10.58□□□□□ -0.72
SF3A1-203ENST00000444440 ACVR1Q04771 509 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 ABHD18Q0P651 414 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 CDH17Q12864 832 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 GSE1Q14687 1217 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 BRD3Q15059 726 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 GPR19Q15760 415 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 CCNG2Q16589 344 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 PRAMEF17Q5VTA0 474 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 PWWP2BQ6NUJ5 590 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 LDB1Q86U70 411 aaPredicted RBP10.58□□□□□ -0.72
SF3A1-203ENST00000444440 DNAAF3Q8N9W5 541 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 OR4E2Q8NGC2 313 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 SLC45A3Q96JT2 553 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 RANBP9Q96S59 729 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 ZPBPQ9BS86 351 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 ULBP3Q9BZM4 244 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 GPN2Q9H9Y4 310 aaPredicted RBP10.58□□□□□ -0.72
SF3A1-203ENST00000444440 SMARCAL1Q9NZC9 954 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 MARCH4Q9P2E8 410 aaPredicted RBP10.58□□□□□ -0.72
SF3A1-203ENST00000444440 CROTQ9UKG9 612 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 TCAF1Q9Y4C2 921 aa10.58□□□□□ -0.72
SF3A1-203ENST00000444440 ERI2A8K979 691 aaKnown RBP10.57□□□□□ -0.72
SF3A1-203ENST00000444440 CFAP99D6REC4 459 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 BTN3A1O00481 513 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 FGGP02679 453 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 APRTP07741 180 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 ACADLP28330 430 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 CDC20Q12834 499 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 TUBB3Q13509 450 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 BOP1Q14137 746 aaKnown RBP10.57□□□□□ -0.72
SF3A1-203ENST00000444440 MAP7Q14244 749 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 DNTTIP2Q5QJE6 756 aaKnown RBP10.57□□□□□ -0.72
SF3A1-203ENST00000444440 DRICH1Q6PGQ1 229 aaPredicted RBP10.57□□□□□ -0.72
SF3A1-203ENST00000444440 PACS1Q6VY07 963 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 PPP1R21Q6ZMI0 780 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 LINC00523Q86TU6 105 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 OOSP2Q86WS3 158 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 RASGRP3Q8IV61 690 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 VRK3Q8IV63 474 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 D2HGDHQ8N465 521 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 PRELID2Q8N945 189 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 SIDT2Q8NBJ9 832 aaKnown RBP10.57□□□□□ -0.72
SF3A1-203ENST00000444440 ACVR1CQ8NER5 493 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 OR52E1Q8NGJ3 308 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 OR5AR1Q8NGP9 310 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 HEXDCQ8WVB3 486 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 UBXN4Q92575 508 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 FERD3LQ96RJ6 166 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 HGH1Q9BTY7 390 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 XKR8Q9H6D3 395 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 PAK5Q9P286 719 aa10.57□□□□□ -0.72
SF3A1-203ENST00000444440 POMT2Q9UKY4 750 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms