RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 UAP1L1Q3KQV9 507 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 ACSBG2Q5FVE4 666 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 CEP85LQ5SZL2 805 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 LRRC8EQ6NSJ5 796 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 XKR5Q6UX68 686 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 TIFABQ6ZNK6 161 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 RAPH1Q70E73 1250 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 CCDC91Q7Z6B0 441 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 GATAD2AQ86YP4 633 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 SLC22A15Q8IZD6 547 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 NKAPQ8N5F7 415 aaKnown RBP15.45■□□□□ 0.06
USP40-206ENST00000443711 ZDHHC1Q8WTX9 485 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 RUFY1Q96T51 708 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 WWP1Q9H0M0 922 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 OR52A5Q9H2C5 316 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 SNX15Q9NRS6 342 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 EURLQ9NYK6 297 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 NLGN3Q9NZ94 848 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 CTNNAL1Q9UBT7 734 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 LGALS13Q9UHV8 139 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 TLK1Q9UKI8 766 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 PSMD13Q9UNM6 376 aa15.45■□□□□ 0.06
USP40-206ENST00000443711 ARID1BQ8NFD5 2236 aaPredicted RBP15.45■□□□□ 0.06
USP40-206ENST00000443711 IFRD1O00458 451 aaPredicted RBP15.44■□□□□ 0.06
USP40-206ENST00000443711 CDX4O14627 284 aaPredicted RBP15.44■□□□□ 0.06
USP40-206ENST00000443711 FFAR2O15552 330 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 PHGDHO43175 533 aaKnown RBP15.44■□□□□ 0.06
USP40-206ENST00000443711 MT-ND3P03897 115 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 ALDOAP04075 364 aaKnown RBP15.44■□□□□ 0.06
USP40-206ENST00000443711 MPOP05164 745 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 MPC1LP0DKB6 136 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 KRT15P19012 456 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 PGGT1BP53609 377 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 SLC14A1Q13336 389 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 SEPT7Q16181 437 aaKnown RBP15.44■□□□□ 0.06
USP40-206ENST00000443711 TAF1BQ53T94 588 aaPredicted RBP15.44■□□□□ 0.06
USP40-206ENST00000443711 CAPRIN2Q6IMN6 1127 aaKnown RBP15.44■□□□□ 0.06
USP40-206ENST00000443711 IYDQ6PHW0 289 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 TMEM207Q6UWW9 146 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 NEK10Q6ZWH5 1172 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 CMC1Q7Z7K0 106 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 PDZD3Q86UT5 571 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 VRK3Q8IV63 474 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 CPNE9Q8IYJ1 553 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 EEF1AKMT1Q8WVE0 214 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 ANKRD7Q92527 254 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 ISL2Q96A47 359 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 DUSP23Q9BVJ7 150 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 VIPAS39Q9H9C1 493 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 ACOT9Q9Y305 439 aa15.44■□□□□ 0.06
USP40-206ENST00000443711 ZFHX2Q9C0A1 2572 aaPredicted RBP15.44■□□□□ 0.06
USP40-206ENST00000443711 A0A087X1B8 175 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 KIR2DS5A0A0G2JLQ3 304 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 A0A0G2JNG1 304 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 A6NCN8 305 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 KIR2DS3K7RE56 304 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 EML2O95834 649 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 C2P06681 752 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 SLC35E2BP0CK96 405 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 GIMD1P0DJR0 217 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 BRAFP15056 766 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 ZNF37AP17032 561 aaPredicted RBP15.43■□□□□ 0.06
USP40-206ENST00000443711 SLC26A3P40879 764 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 ABRQ12979 859 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 ZNF460Q14592 562 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 KIR2DS5Q14953 304 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 INAVAQ3KP66 663 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 OGFOD3Q6PK18 319 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 TBC1D1Q86TI0 1168 aaPredicted RBP15.43■□□□□ 0.06
USP40-206ENST00000443711 CYP4X1Q8N118 509 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 MYO1HQ8N1T3 1032 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 OR4C6Q8NH72 309 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 MZB1Q8WU39 189 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 SKA2Q8WVK7 121 aaPredicted RBP15.43■□□□□ 0.06
USP40-206ENST00000443711 LINGO1Q96FE5 620 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 PDLIM5Q96HC4 596 aaKnown RBP15.43■□□□□ 0.06
USP40-206ENST00000443711 CABS1Q96KC9 395 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 RMDN2Q96LZ7 410 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 C12orf66Q96MD2 445 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 FOPNLQ96NB1 174 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 INSM2Q96T92 566 aaPredicted RBP15.43■□□□□ 0.06
USP40-206ENST00000443711 RXFP3Q9NSD7 469 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.43■□□□□ 0.06
USP40-206ENST00000443711 WDR37Q9Y2I8 494 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 HEBP2Q9Y5Z4 205 aa15.43■□□□□ 0.06
USP40-206ENST00000443711 GOLGA4Q13439 2230 aaKnown RBP15.43■□□□□ 0.06
USP40-206ENST00000443711 VPS13AQ96RL7 3174 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 RIF1Q5UIP0 2472 aaKnown RBP15.42■□□□□ 0.06
USP40-206ENST00000443711 TRBV23OR9-2A0A075B6M9 112 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 A0A096LPK6 155 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 B4DGG1 531 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 RGS16O15492 202 aaPredicted RBP15.42■□□□□ 0.06
USP40-206ENST00000443711 RFPL1O75677 317 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 WISP3O95389 354 aaPredicted RBP15.42■□□□□ 0.06
USP40-206ENST00000443711 CCDC166P0CW27 439 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 ACADLP28330 430 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 MAGEA12P43365 314 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 MAPK9P45984 424 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 CSRP3P50461 194 aa15.42■□□□□ 0.06
USP40-206ENST00000443711 CLCA4Q14CN2 919 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms