RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-208	ENST00000443046	GPR39	O43194	453 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	ZNF749	O43361	778 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	IGHE	P01854	428 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	CYP2A7	P20853	494 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	CDH3	P22223	829 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	OTX2	P32243	289 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	SSR1	P43307	286 aa	Known RBP	13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	PREP	P48147	710 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	TAS2R40	P59535	323 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	LLGL1	Q15334	1064 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	KYNU	Q16719	465 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	GPRC6A	Q5T6X5	926 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	ZDHHC20	Q5W0Z9	365 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	ARMC6	Q6NXE6	501 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	ZADH2	Q8N4Q0	377 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	CLEC1A	Q8NC01	280 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	OR4E2	Q8NGC2	313 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	OR2L2	Q8NH16	312 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	TM9SF4	Q92544	642 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	AGAP3	Q96P47	875 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	TRABD	Q9H4I3	376 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	AGPAT4	Q9NRZ5	378 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	ANO10	Q9NW15	660 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	MTOR	P42345	2549 aa		13.97	□□□□□ -0.17
HMGN1-208	ENST00000443046	NUP210L	Q5VU65	1888 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	KLHL33	A6NCF5	533 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	ZNF487	B1APH4	448 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046		C9J4A7	227 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046		E7EQ34	232 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	HBQ1	P09105	142 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	ST6GAL1	P15907	406 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	HLA-DPA1	P20036	260 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	AGXT	P21549	392 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	KDELR1	P24390	212 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	ITGA3	P26006	1051 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	PRDX3	P30048	256 aa	Known RBP	13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	SPAM1	P38567	509 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	GLRB	P48167	497 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	PER3	P56645	1201 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	ANO6	Q4KMQ2	910 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	SLC9A4	Q6AI14	798 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	IGFL2	Q6UWQ7	119 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	RAPGEF5	Q92565	580 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	LINC00615	Q96LM1	132 aa	Predicted RBP	13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	RMDN2	Q96LZ7	410 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	ZNF830	Q96NB3	372 aa	Predicted RBP	13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	OLFM3	Q96PB7	478 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	TRAPPC9	Q96Q05	1148 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	GLOD4	Q9HC38	313 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	P4HTM	Q9NXG6	502 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	CSAG2	Q9Y5P2	127 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	COLEC10	Q9Y6Z7	277 aa		13.96	□□□□□ -0.17
HMGN1-208	ENST00000443046	GLYATL1P3	A0A0U1RQE8	302 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	MASP2	O00187	686 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	BTN3A3	O00478	584 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	SGTA	O43765	313 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	ZG16	O60844	167 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	CNOT3	O75175	753 aa	Known RBP	13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	PROSC	O94903	275 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	EPO	P01588	193 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	CBSL	P0DN79	551 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	EDN3	P14138	238 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	NDUFS1	P28331	727 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	CBS	P35520	551 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	GJC1	P36383	396 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	TSFM	P43897	325 aa	Known RBP	13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	AP1B1	Q10567	949 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	PRKAA1	Q13131	559 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	ITGA9	Q13797	1035 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	TEX44	Q53QW1	395 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	FNBP1L	Q5T0N5	605 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	CCDC70	Q6NSX1	233 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	FAM151B	Q6UXP7	276 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	CDHR3	Q6ZTQ4	885 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	PPP1R32	Q7Z5V6	425 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	MCEMP1	Q8IX19	187 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	ACVR1C	Q8NER5	493 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	OR2Y1	Q8NGV0	311 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	PPP4R1	Q8TF05	950 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	GBP5	Q96PP8	586 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	WDR77	Q9BQA1	342 aa	Predicted RBP	13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	C17orf62	Q9BQA9	187 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	LMBRD1	Q9NUN5	540 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	OSGIN2	Q9Y236	505 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	PKDREJ	Q9NTG1	2253 aa		13.95	□□□□□ -0.18
HMGN1-208	ENST00000443046	MYO7B	Q6PIF6	2116 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	HEATR9	A2RTY3	570 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	C3orf70	A6NLC5	250 aa	Predicted RBP	13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	BTN3A1	O00481	513 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	PEX12	O00623	359 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	LDB2	O43679	373 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	PMPCB	O75439	489 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	UMOD	P07911	640 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	STS	P08842	583 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	CD63	P08962	238 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	PYGM	P11217	842 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	PBLD	P30039	288 aa	Predicted RBP	13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	GABRA4	P48169	554 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	LMAN1	P49257	510 aa		13.94	□□□□□ -0.18
HMGN1-208	ENST00000443046	NAA30	Q147X3	362 aa	Predicted RBP	13.94	□□□□□ -0.18

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