RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 PRRC2AP48634 2157 aaKnown RBP3.38□□□□□ -1.87
UPP2-IT1-201ENST00000439185 FRMD3A2A2Y4 597 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 PLK4O00444 970 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 MAP2K7O14733 419 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CSPG5O95196 566 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 OR2C1O95371 312 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 RAF1P04049 648 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 HIST1H2ABP04908 130 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ACTN1P12814 892 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 HIST1H2ADP20671 130 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ACADLP28330 430 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TM4SF1P30408 202 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 MAPK4P31152 587 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CEACAM8P31997 349 aaPredicted RBP3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 MMP15P51511 669 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CTSCP53634 463 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CD81P60033 236 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ARF3P61204 181 aaPredicted RBP3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ARF1P84077 181 aaKnown RBP3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CRYMQ14894 314 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ZSCAN23Q3MJ62 389 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ACSM2BQ68CK6 577 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 HIST3H2AQ7L7L0 130 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ERC1Q8IUD2 1116 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 RASGEF1CQ8N431 466 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ZNF843Q8N446 348 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 WDTC1Q8N5D0 677 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 OR2T12Q8NG77 320 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 OR8K5Q8NH50 307 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 HM13Q8TCT9 377 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TRPC4APQ8TEL6 797 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SCFD2Q8WU76 684 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ELMOD3Q96FG2 381 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 OR2A14Q96R47 310 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 LAT2Q9GZY6 243 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 PELI2Q9HAT8 420 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SEPT11Q9NVA2 429 aaKnown RBP3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SETD4Q9NVD3 440 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 COQ3Q9NZJ6 369 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TP53TG3Q9ULZ0 132 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 RABGAP1Q9Y3P9 1069 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TMEM184BQ9Y519 407 aaPredicted RBP3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SESN1Q9Y6P5 492 aa3.37□□□□□ -1.87
UPP2-IT1-201ENST00000439185 IGHV4-4A0A075B6R2 117 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SMAD9O15198 467 aaKnown RBP3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 OGG1O15527 345 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 PI15O43692 258 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SH3BP5O60239 455 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 GPR137BO60478 399 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 GPC4O75487 556 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 WDHD1O75717 1129 aaPredicted RBP3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 AP2A2O94973 939 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 EDN1P05305 212 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 FRMD6-AS1P0C7T7 363 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 DNAH10OSP0CZ25 163 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CDH8P55286 799 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 GEMIN4P57678 1058 aaKnown RBP3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 RIGQ13278 110 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ASTE1Q2TB18 679 aaPredicted RBP3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CFAP77Q6ZQR2 320 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 C4orf50Q6ZRC1 276 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 Q6ZSR9 355 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 FASTKD5Q7L8L6 764 aaKnown RBP3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 PLD3Q8IV08 490 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 FBXL16Q8N461 479 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 C1orf52Q8N6N3 182 aaKnown RBP3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SLC38A9Q8NBW4 561 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 HJURPQ8NCD3 748 aaPredicted RBP3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SEMA4DQ92854 862 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SLC47A1Q96FL8 570 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 PGAM5Q96HS1 289 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 FOXN4Q96NZ1 517 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 EIF2B3Q9NR50 452 aaKnown RBP3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 KLK13Q9UKR3 277 aa3.36□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TEX13DA0A0J9YY54 714 aaPredicted RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 H3BQ06 376 aaPredicted RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 HS6ST1O60243 411 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 PTP4A3O75365 173 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SRPRAP08240 638 aaKnown RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CCR10P46092 362 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 GPR143P51810 404 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SIM2Q14190 667 aaPredicted RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CTU2Q2VPK5 515 aaKnown RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 RARS2Q5T160 578 aaKnown RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CHST9Q7L1S5 443 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 SLC16A9Q7RTY1 509 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CCDC190Q86UF4 302 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TEX11Q8IYF3 940 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TTC39CQ8N584 583 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 GCSAMQ8N6F7 178 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TREX2Q9BQ50 279 aaPredicted RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 PLK3Q9H4B4 646 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TRMT1Q9NXH9 659 aaKnown RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 FBXL17Q9UF56 701 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 LAS1LQ9Y4W2 734 aaKnown RBP3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CROCCQ5TZA2 2017 aa3.35□□□□□ -1.87
UPP2-IT1-201ENST00000439185 A8MU10 97 aa3.34□□□□□ -1.87
UPP2-IT1-201ENST00000439185 CDRT15L2A8MXV6 281 aa3.34□□□□□ -1.87
UPP2-IT1-201ENST00000439185 TMCC2O75069 709 aa3.34□□□□□ -1.87
UPP2-IT1-201ENST00000439185 ZBED4O75132 1171 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms