RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PWP2Q15269 919 aaKnown RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 C15orf40Q8WUR7 153 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 STRA6Q9BX79 667 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 LYARQ9NX58 379 aaKnown RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 BAIAP2Q9UQB8 552 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 HPSEQ9Y251 543 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF234Q14588 700 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 LRIF1Q5T3J3 769 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 KCTD4Q8WVF5 259 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 SIPA1Q96FS4 1042 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 CAMK1GQ96NX5 476 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 UCK2Q9BZX2 261 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 WDR26Q9H7D7 661 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 TNFRSF11BO00300 401 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 NME6O75414 186 aaPredicted RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 HSPB3Q12988 150 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 MAMLD1Q13495 774 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 FASTKD3Q14CZ7 662 aaKnown RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 DHDDSQ86SQ9 333 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 RELL1Q8IUW5 271 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 MBOAT7Q96N66 472 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 ABCG8Q9H221 673 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 TRAF6Q9Y4K3 522 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 PCDHGA11Q9Y5H2 935 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 PRDM15P57071 1507 aaPredicted RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 FAM86B1E9PN63 330 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 GBX2P52951 348 aaPredicted RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 DACT2Q5SW24 774 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 CPNE9Q8IYJ1 553 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 OXR1Q8N573 874 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 INO80EQ8NBZ0 244 aaPredicted RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 COPS5Q92905 334 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 ASPNQ9BXN1 380 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 ATG10Q9H0Y0 220 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 NELFAQ9H3P2 528 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 GLOD4Q9HC38 313 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 AGPSO00116 658 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 E2F3O00716 465 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 FABP3P05413 133 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 CORO7P57737 925 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 CRADDP78560 199 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 SLC9B2Q86UD5 537 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 LNX2Q8N448 690 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 NUS1Q96E22 293 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 TAS2R7Q9NYW3 318 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF878C9JN71 531 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 AP5Z1O43299 807 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 PRAMEF1O95521 474 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 TMBIM6P55061 237 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 ADARP55265 1226 aaKnown RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 E2F2Q14209 437 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 POLNQ7Z5Q5 900 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 TSSK3Q96PN8 268 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 WDR18Q9BV38 432 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 NUSAP1Q9BXS6 441 aaKnown RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 GNAZP19086 355 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 TIE1P35590 1138 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 CD47Q08722 323 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 SF3B4Q15427 424 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 C2orf27AQ580R0 203 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 EIF5AL1Q6IS14 154 aaKnown RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 PAMR1Q6UXH9 720 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 GPAT4Q86UL3 456 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 TMEM161BQ8NDZ6 487 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 OR6K6Q8NGW6 343 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 KLHL5Q96PQ7 755 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 TCF12Q99081 682 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 PRPF19Q9UMS4 504 aaKnown RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 CAPN6Q9Y6Q1 641 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 NSG1P42857 185 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 UBAP2Q5T6F2 1119 aaKnown RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 ZC3H14Q6PJT7 736 aaKnown RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 IFT27Q9BW83 186 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 B3GNT4Q9C0J1 378 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 PCDHGA6Q9Y5G7 932 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 A8MUI8 341 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 STOMP27105 288 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 SSX6Q7RTT6 188 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 OR10H4Q8NGA5 316 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 SLC25A36Q96CQ1 311 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 BTBD1Q9H0C5 482 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 RHOJQ9H4E5 214 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 SEC61A2Q9H9S3 476 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 CARS2Q9HA77 564 aaKnown RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 STOX2Q9P2F5 926 aaPredicted RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 IL36AQ9UHA7 158 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 FKBP7Q9Y680 259 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 PIGBOS1A0A0B4J2F0 54 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 FAM221BA6H8Z2 402 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 ARPC2O15144 300 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 FOSL2P15408 326 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 CTBP1Q13363 440 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 KLHL22Q53GT1 634 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 RNASEH2BQ5TBB1 312 aaKnown RBP11.04□□□□□ -0.64
SCN4A-201ENST00000435607 TMEM126BQ8IUX1 230 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 E9PAM4 449 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 AP2A2O94973 939 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 ITGA5P08648 1049 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 CYP4B1P13584 511 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms