RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 BATF3Q9NR55 127 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 FZD10Q9ULW2 581 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 ERI3O43414 337 aaKnown RBP11.96□□□□□ -0.49
UBE3B-203ENST00000434735 LIASO43766 372 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 KLRC4O43908 158 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 SERPINE1P05121 402 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 RABIFP47224 123 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 RNASEH2BQ5TBB1 312 aaKnown RBP11.96□□□□□ -0.49
UBE3B-203ENST00000434735 GCNT7Q6ZNI0 430 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 TMEM40Q8WWA1 233 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 PCYT2Q99447 389 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 SMOQ99835 787 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 FNDC11Q9BVV2 318 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 C1QTNF1Q9BXJ1 281 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 GRIP2Q9C0E4 1043 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 CAB39LQ9H9S4 337 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 CHRAC1Q9NRG0 131 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 RCOR3Q9P2K3 495 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-203ENST00000434735 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.49
UBE3B-203ENST00000434735 HAS3O00219 553 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 RECQL5O94762 991 aaPredicted RBP11.96□□□□□ -0.5
UBE3B-203ENST00000434735 RBPJQ06330 500 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 CLEC1AQ8NC01 280 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 MDM1Q8TC05 714 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 LRRC39Q96DD0 335 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 ZNF607Q96SK3 696 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 PIGUQ9H490 435 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 USP29Q9HBJ7 922 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 OGDHLQ9ULD0 1010 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 C2orf74A8MZ97 194 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 DHX15O43143 795 aaKnown RBP11.96□□□□□ -0.5
UBE3B-203ENST00000434735 LDLRP01130 860 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 FBLP22087 321 aaKnown RBP11.96□□□□□ -0.5
UBE3B-203ENST00000434735 CD6P30203 668 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 NOVA1P51513 510 aaKnown RBP11.96□□□□□ -0.5
UBE3B-203ENST00000434735 MAPKAPK3Q16644 382 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 PAOXQ6QHF9 649 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 Q6ZVL8 140 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 IKBIPQ70UQ0 350 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 DHFR2Q86XF0 187 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 RAB7BQ96AH8 199 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 GBA3Q9H227 469 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 HCSTQ9UBK5 93 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 B4GALT7Q9UBV7 327 aa11.96□□□□□ -0.5
UBE3B-203ENST00000434735 ZNF840PA6NDX5 716 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 J3KR12 359 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 CDC7O00311 574 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 NPC1O15118 1278 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 SYNGR4O95473 234 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 PRG2P13727 222 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 STAT5AP42229 794 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 SLC10A7Q0GE19 358 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 OTUD3Q5T2D3 398 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 NUP54Q7Z3B4 507 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 TREML1Q86YW5 311 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 NLGN4XQ8N0W4 816 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 TEX19Q8NA77 164 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 VANGL1Q8TAA9 524 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 ITFG1Q8TB96 612 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 STK32AQ8WU08 396 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 SLC25A36Q96CQ1 311 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 XKR8Q9H6D3 395 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 GAREM1Q9H706 876 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 REEP1Q9H902 201 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 TPRKBQ9Y3C4 175 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 CPNE6O95741 557 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 ZNF30P17039 623 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 CALB2P22676 271 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 ATP5F1P24539 256 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 SELENOVP59797 346 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 CCNIQ14094 377 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 GFOD2Q3B7J2 385 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 ABHD17BQ5VST6 288 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 RALGPS2Q86X27 583 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 RAB43Q86YS6 212 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 TMEM151BQ8IW70 566 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 TCEAL4Q96EI5 215 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 RADILQ96JH8 1075 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 SLC17A9Q9BYT1 436 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 RIBC2Q9H4K1 309 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 POLR3HQ9Y535 204 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 TMX2-CTNND1H3BSU7 103 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 SNPHO15079 494 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 ANXA4P09525 319 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 GRIA3P42263 894 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 FNTBP49356 437 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 CSNK1EP49674 416 aaKnown RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 CTBP2P56545 445 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 MRPS35P82673 323 aaKnown RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 TRIM25Q14258 630 aaKnown RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 LARS2Q15031 903 aaKnown RBP11.95□□□□□ -0.5
UBE3B-203ENST00000434735 NDUFA5Q16718 116 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 NCEH1Q6PIU2 408 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 CPNE9Q8IYJ1 553 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 ART5Q96L15 291 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 HIST1H2AAQ96QV6 131 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 ST6GALNAC4Q9H4F1 302 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 SLCO3A1Q9UIG8 710 aa11.95□□□□□ -0.5
UBE3B-203ENST00000434735 GOLGA4Q13439 2230 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms