RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 SNX15Q9NRS6 342 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 IKZF3Q9UKT9 509 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 RP1P56715 2156 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 APBB3O95704 486 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 MYL9P24844 172 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 ENPP2Q13822 863 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 PDK4Q16654 411 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 EXOC3L1Q86VI1 746 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 ZNF280BQ86YH2 543 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 PLXDC1Q8IUK5 500 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 RNF31Q96EP0 1072 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 APOLD1Q96LR9 279 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 NSMCE3Q96MG7 304 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 KCNH6Q9H252 994 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 TTYH1Q9H313 450 aaPredicted RBP9.8□□□□□ -0.84
FN1-209ENST00000432072 NOL11Q9H8H0 719 aaKnown RBP9.8□□□□□ -0.84
FN1-209ENST00000432072 SPHK2Q9NRA0 654 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 ZDHHC3Q9NYG2 299 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 TMEM98Q9Y2Y6 226 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 MED31Q9Y3C7 131 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 MTMR11A4FU01 709 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 PRODHO43272 600 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 IPO13O94829 963 aaKnown RBP9.8□□□□□ -0.84
FN1-209ENST00000432072 DRD4P21917 467 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 ARFIP1P53367 373 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 CHIT1Q13231 466 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 IRF5Q13568 498 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 LYSMD4Q5XG99 296 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 NIPAL1Q6NVV3 410 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 SPATA19Q7Z5L4 167 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 HORMAD2Q8N7B1 307 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 CYP2S1Q96SQ9 504 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 TPSD1Q9BZJ3 242 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 ZNF576Q9H609 170 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 NUDT4Q9NZJ9 180 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 PTGFRNQ9P2B2 879 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 EPHB6O15197 1021 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 PAK4O96013 591 aaPredicted RBP9.8□□□□□ -0.84
FN1-209ENST00000432072 ACADLP28330 430 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 TM4SF4P48230 202 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 EIPR1Q53HC9 387 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 PAPD7Q5XG87 772 aaKnown RBP9.8□□□□□ -0.84
FN1-209ENST00000432072 BBS12Q6ZW61 710 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 C12orf40Q86WS4 652 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 HPS6Q86YV9 775 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 PIK3C3Q8NEB9 887 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 ZMAT2Q96NC0 199 aaKnown RBP9.8□□□□□ -0.84
FN1-209ENST00000432072 PCDHGA11Q9Y5H2 935 aa9.8□□□□□ -0.84
FN1-209ENST00000432072 GRID2O43424 1007 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 DLDP09622 509 aaKnown RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 HNRNPLP14866 589 aaKnown RBP eCLIP9.79□□□□□ -0.845e-8■■□□□ 12.5
FN1-209ENST00000432072 CXCR1P25024 350 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 HNRNPDQ14103 355 aaKnown RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 GFOD2Q3B7J2 385 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 SLC9A4Q6AI14 798 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 PTCRAQ6ISU1 281 aaPredicted RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 ZNF75CPQ92670 426 aaPredicted RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 TSSK3Q96PN8 268 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 DNAJB4Q9UDY4 337 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 SPIN1Q9Y657 262 aaPredicted RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 TAF4O00268 1085 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 AKAP8O43823 692 aaKnown RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 SLC22A3O75751 556 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 CHRNGP07510 517 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 ZNF30P17039 623 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 NCBP2P52298 156 aaKnown RBP eCLIP9.79□□□□□ -0.84
FN1-209ENST00000432072 TAS2R40P59535 323 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 RASGEF1BQ0VAM2 473 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 PRAMEF14Q5SWL7 426 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 PRAMEF13Q5VWM6 474 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 FIP1L1Q6UN15 594 aaKnown RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 RAB7BQ96AH8 199 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 MMABQ96EY8 250 aaPredicted RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 PTGES2Q9H7Z7 377 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 RC3H2Q9HBD1 1191 aaKnown RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 TMBIM4Q9HC24 238 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 HRASLS2Q9NWW9 162 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 C2orf74A8MZ97 194 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 ACOT7O00154 380 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 TNFRSF10BO14763 440 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 TGFB1I1O43294 461 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 ARHGDIBP52566 201 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 FAM214AQ32MH5 1076 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 ZFP1Q6P2D0 407 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 CLEC20AQ6ZU45 233 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 OR4C6Q8NH72 309 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 RORBQ92753 470 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 KCNF1Q9H3M0 494 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 PCDHGA12O60330 932 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 ONECUT3O60422 494 aaPredicted RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 COQ9O75208 318 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 ZNF37AP17032 561 aaPredicted RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 ITGA3P26006 1051 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 HSF2Q03933 536 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 ZSWIM7Q19AV6 140 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 SOWAHAQ2M3V2 549 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 NOXRED1Q6NXP6 359 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 FBXO42Q6P3S6 717 aa9.79□□□□□ -0.84
FN1-209ENST00000432072 VASH1Q7L8A9 365 aaPredicted RBP9.79□□□□□ -0.84
FN1-209ENST00000432072 HHIPQ96QV1 700 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms