RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 USP27XA6NNY8 438 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 K7ENP7 123 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 POLR1CO15160 346 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-207ENST00000430858 ZNF185O15231 689 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 OR1I1O60431 355 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 MLNP12872 115 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 NMBRP28336 390 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 PDHA2P29803 388 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 TTPAP49638 278 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 ATP1A2P50993 1020 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 GNG11P61952 73 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 VAC14Q08AM6 782 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 SEMA3AQ14563 771 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 TGIF1Q15583 401 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 CACHD1Q5VU97 1274 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 ANKS6Q68DC2 871 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 CYB5D1Q6P9G0 228 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 INO80CQ6PI98 192 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-207ENST00000430858 CEACAM20Q6UY09 585 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 CCDC81Q6ZN84 652 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 FAM92BQ6ZTR7 304 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 ZFAND4Q86XD8 727 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 MCUQ8NE86 351 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 SNRNP27Q8WVK2 155 aaKnown RBP9.57□□□□□ -0.88
HDAC6-207ENST00000430858 JPH3Q8WXH2 748 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-207ENST00000430858 KLHL6Q8WZ60 621 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 CPT1BQ92523 772 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 ELMO1Q92556 727 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 UBXN4Q92575 508 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 TFGQ92734 400 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-207ENST00000430858 PMEPA1Q969W9 287 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 FERD3LQ96RJ6 166 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 TSSK1BQ9BXA7 367 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 MVB12BQ9H7P6 319 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 HRASLS2Q9NWW9 162 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 SYBUQ9NX95 663 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 SIDT1Q9NXL6 827 aaKnown RBP9.57□□□□□ -0.88
HDAC6-207ENST00000430858 SEMA5BQ9P283 1151 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 SOX13Q9UN79 622 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 NEU2Q9Y3R4 380 aa9.57□□□□□ -0.88
HDAC6-207ENST00000430858 ANKRD11Q6UB99 2663 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 SLC5A10A0PJK1 596 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 MAGEB16A2A368 324 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 TLCD2A6NGC4 264 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 MATN2O00339 956 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 PRMT5O14744 637 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 CD3EAPO15446 510 aaKnown RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 TMEM63AO94886 807 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 NELFEP18615 380 aaKnown RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 PAMP19021 973 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 ARNTP27540 789 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 PREPP48147 710 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 SEPHS1P49903 392 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 TERF1P54274 439 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 FOXM1Q08050 763 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 PRKAA1Q13131 559 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 IL11RAQ14626 422 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 KCTD19Q17RG1 926 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 SYTL3Q4VX76 610 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 DNTTIP2Q5QJE6 756 aaKnown RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 MANEAQ5SRI9 462 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 ARHGAP40Q5TG30 622 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 ANKRD22Q5VYY1 191 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 PAPD7Q5XG87 772 aaKnown RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 MRNIPQ6NTE8 343 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 ARMC6Q6NXE6 501 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 LRRC6Q86X45 466 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 KMT5CQ86Y97 462 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 CARFQ8N187 725 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 OR4E2Q8NGC2 313 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 LCN9Q8WX39 176 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 MFSD3Q96ES6 412 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 SLC41A2Q96JW4 573 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 UBL7Q96S82 380 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 NAPGQ99747 312 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 CARD6Q9BX69 1037 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 TFB2MQ9H5Q4 396 aaKnown RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 CPNE5Q9HCH3 593 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 XAB2Q9HCS7 855 aaKnown RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 WDR70Q9NW82 654 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 SAMD15Q9P1V8 674 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 RALYQ9UKM9 306 aaKnown RBP9.56□□□□□ -0.88
HDAC6-207ENST00000430858 PYCARDQ9ULZ3 195 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 CFAP47Q6ZTR5 3102 aa9.56□□□□□ -0.88
HDAC6-207ENST00000430858 LAMA5O15230 3695 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 UBA6A0AVT1 1052 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 CTAGE9A4FU28 777 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 OR6C74A6NCV1 312 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 SDR42E2A6NKP2 422 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PFDN6O15212 129 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 KIF1CO43896 1103 aaKnown RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 AVILO75366 819 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 NDUFS3O75489 264 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 VAPBO95292 243 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 RPS3P23396 243 aaKnown RBP eCLIP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 ACADLP28330 430 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 CCR7P32248 378 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PPP1CAP62136 330 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 RHDQ02161 417 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 BOP1Q14137 746 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms